RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TAF6LQ9Y6J9 622 aa9.01□□□□□ -0.97
COL11A1-208ENST00000470170 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 SEMA7AO75326 666 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 GSTM1P09488 218 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 ZSCAN22P10073 491 aaPredicted RBP9□□□□□ -0.97
COL11A1-208ENST00000470170 PNLIPP16233 465 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 CD247P20963 164 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 EIF6P56537 245 aaKnown RBP9□□□□□ -0.97
COL11A1-208ENST00000470170 CWF19L1Q69YN2 538 aaKnown RBP9□□□□□ -0.97
COL11A1-208ENST00000470170 GALNT18Q6P9A2 607 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 TMEM52Q8NDY8 209 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 RASGRP4Q8TDF6 673 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 SPATA32Q96LK8 384 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 GCM1Q9NP62 436 aa9□□□□□ -0.97
COL11A1-208ENST00000470170 WTIPA6NIX2 430 aaPredicted RBP8.99□□□□□ -0.97
COL11A1-208ENST00000470170 FIBCD1Q8N539 461 aa8.99□□□□□ -0.97
COL11A1-208ENST00000470170 FHOD1Q9Y613 1164 aa8.99□□□□□ -0.97
COL11A1-208ENST00000470170 CBFA2T2O43439 604 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 PRKCAP17252 672 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 GIPRP48546 466 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 CIAPIN1Q6FI81 312 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 NAT16Q8N8M0 369 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 JMJD8Q96S16 334 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 NOL6Q9H6R4 1146 aaKnown RBP8.98□□□□□ -0.97
COL11A1-208ENST00000470170 PCDHB10Q9UN67 800 aa8.98□□□□□ -0.97
COL11A1-208ENST00000470170 NUAK1O60285 661 aa8.97□□□□□ -0.97
COL11A1-208ENST00000470170 ITGA4P13612 1032 aa8.97□□□□□ -0.97
COL11A1-208ENST00000470170 GJA8P48165 433 aa8.97□□□□□ -0.97
COL11A1-208ENST00000470170 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
COL11A1-208ENST00000470170 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
COL11A1-208ENST00000470170 NUP43Q8NFH3 380 aa8.97□□□□□ -0.97
COL11A1-208ENST00000470170 SRRTQ9BXP5 876 aaKnown RBP8.97□□□□□ -0.97
COL11A1-208ENST00000470170 IMPACTQ9P2X3 320 aa8.97□□□□□ -0.97
COL11A1-208ENST00000470170 A0A1W2PQ45 241 aaPredicted RBP8.96□□□□□ -0.98
COL11A1-208ENST00000470170 A0A1W2PQY0 241 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 VIPR1P32241 457 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 ERVFRD-1P60508 538 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 GNPTABQ3T906 1256 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 LCE4AQ5TA78 99 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 RGS22Q8NE09 1264 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 ZDHHC15Q96MV8 337 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 HAUS7Q99871 368 aa8.96□□□□□ -0.98
COL11A1-208ENST00000470170 MBD1Q9UIS9 605 aaPredicted RBP8.96□□□□□ -0.98
COL11A1-208ENST00000470170 A0A1W2PQH9 124 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 CYP4F8P98187 520 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 PPP2R5DQ14738 602 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 ADCY4Q8NFM4 1077 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 FCRL3Q96P31 734 aaPredicted RBP8.95□□□□□ -0.98
COL11A1-208ENST00000470170 IRF2BPLQ9H1B7 796 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 ACBD3Q9H3P7 528 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 ACSL6Q9UKU0 697 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 SF3B6Q9Y3B4 125 aaKnown RBP8.95□□□□□ -0.98
COL11A1-208ENST00000470170 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
COL11A1-208ENST00000470170 HRKO00198 91 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 CD3EP07766 207 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 IFNGR1P15260 489 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 ARL4AP40617 200 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 LAPTM5Q13571 262 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 TCEAL1Q15170 157 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 LCE1DQ5T752 114 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 SIAH1Q8IUQ4 282 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 C19orf47Q8N9M1 422 aaKnown RBP8.94□□□□□ -0.98
COL11A1-208ENST00000470170 OR6P1Q8NGX9 317 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 SHDQ96IW2 340 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 PHAXQ9H814 394 aaKnown RBP8.94□□□□□ -0.98
COL11A1-208ENST00000470170 SIRT5Q9NXA8 310 aa8.94□□□□□ -0.98
COL11A1-208ENST00000470170 CNOT6Q9ULM6 557 aaKnown RBP8.94□□□□□ -0.98
COL11A1-208ENST00000470170 NUDT19A8MXV4 375 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 FGF10O15520 208 aaPredicted RBP8.93□□□□□ -0.98
COL11A1-208ENST00000470170 MPOP05164 745 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 EPHB3P54753 998 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 YBX1P67809 324 aaKnown RBP8.93□□□□□ -0.98
COL11A1-208ENST00000470170 SSPNQ14714 243 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 PPP2R5EQ16537 467 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 CPLX3Q8WVH0 158 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 KLHL25Q9H0H3 589 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 CNTD2Q9H8S5 307 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 TNFRSF12AQ9NP84 129 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 KLHL14Q9P2G3 628 aa8.93□□□□□ -0.98
COL11A1-208ENST00000470170 MSL3P1P0C860 447 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 NOP2P46087 812 aaKnown RBP8.92□□□□□ -0.98
COL11A1-208ENST00000470170 SLC7A5Q01650 507 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 RAB3GAP1Q15042 981 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 HLA-DQA1Q5Y7H0 255 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 HEATR6Q6AI08 1181 aaKnown RBP8.92□□□□□ -0.98
COL11A1-208ENST00000470170 AMIGO3Q86WK7 504 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 JAMLQ86YT9 394 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 KLHL6Q8WZ60 621 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 FGD4Q96M96 766 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 TGIF2Q9GZN2 237 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 WHRNQ9P202 907 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 KCTD3Q9Y597 815 aa8.92□□□□□ -0.98
COL11A1-208ENST00000470170 A0A087WZG4 1122 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 EPHX1P07099 455 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 POU4F1Q01851 419 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 MVKQ03426 396 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 CYP2R1Q6VVX0 501 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 FAM169BQ8N8A8 192 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 INPP5FQ9Y2H2 1132 aa8.91□□□□□ -0.98
COL11A1-208ENST00000470170 DIS3Q9Y2L1 958 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms