RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
COL9A3-208ENST00000469802 HAND2P61296 217 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 C1orf53Q5VUE5 145 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 SLC39A5Q6ZMH5 540 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 ANKRD35Q8N283 1001 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 DCAF4Q8WV16 495 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 LENG1Q96BZ8 264 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-208ENST00000469802 AGBL1Q96MI9 1066 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
COL9A3-208ENST00000469802 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
COL9A3-208ENST00000469802 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 TKFCQ3LXA3 575 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 AKNAD1Q5T1N1 836 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 BTNL9Q6UXG8 535 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 TMEM47Q9BQJ4 181 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 A1CFQ9NQ94 594 aaKnown RBP19.25■□□□□ 0.67
COL9A3-208ENST00000469802 HOMER2Q9NSB8 354 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 RNF146Q9NTX7 359 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-208ENST00000469802 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
COL9A3-208ENST00000469802 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
COL9A3-208ENST00000469802 PGK1P00558 417 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 IKQ13123 557 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-208ENST00000469802 LRIT3Q3SXY7 679 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 RRP12Q5JTH9 1297 aaKnown RBP19.24■□□□□ 0.67
COL9A3-208ENST00000469802 RNF180Q86T96 592 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 UBE2OQ9C0C9 1292 aaKnown RBP19.24■□□□□ 0.67
COL9A3-208ENST00000469802 RANBP17Q9H2T7 1088 aaKnown RBP19.24■□□□□ 0.67
COL9A3-208ENST00000469802 TOMM22Q9NS69 142 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 NEDD4P46934 1319 aa19.24■□□□□ 0.67
COL9A3-208ENST00000469802 MYH6P13533 1939 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ADCY6O43306 1168 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-208ENST00000469802 MDM2Q00987 491 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-208ENST00000469802 CNTN2Q02246 1040 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 TRIM60Q495X7 471 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 MFSD6Q6ZSS7 791 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ARMCX2Q7L311 632 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ABHD16BQ9H3Z7 469 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 DIAPH3Q9NSV4 1193 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ZHX1Q9UKY1 873 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-208ENST00000469802 FAM184BQ9ULE4 1060 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ATP11BQ9Y2G3 1177 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
COL9A3-208ENST00000469802 ASTN1O14525 1302 aa19.23■□□□□ 0.67
COL9A3-208ENST00000469802 A0A1W2PQ45 241 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-208ENST00000469802 A0A1W2PQY0 241 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 HIP1O00291 1037 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 DUSP11O75319 330 aaKnown RBP19.22■□□□□ 0.67
COL9A3-208ENST00000469802 SNHG28P0DPA3 235 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 ACVR2BQ13705 512 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 TTBK2Q6IQ55 1244 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 CWC27Q6UX04 472 aaKnown RBP19.22■□□□□ 0.67
COL9A3-208ENST00000469802 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 FERMT2Q96AC1 680 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 TTC14Q96N46 770 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 TRERF1Q96PN7 1200 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
COL9A3-208ENST00000469802 RNF41Q9H4P4 317 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-208ENST00000469802 PDLIM7Q9NR12 457 aa19.22■□□□□ 0.67
COL9A3-208ENST00000469802 SOWAHBA6NEL2 793 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 POTEB2H3BUK9 544 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 ICAM1P05362 532 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 PDHBP11177 359 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 ALAS1P13196 640 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 PDE4AP27815 886 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 CST5P28325 142 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-208ENST00000469802 NT5C2P49902 561 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 SNAP25P60880 206 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 MUM1L1Q5H9M0 696 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 CCSAPQ6IQ19 270 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-208ENST00000469802 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 CCDC174Q6PII3 467 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 DSCC1Q9BVC3 393 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 UPF3AQ9H1J1 476 aaKnown RBP19.21■□□□□ 0.67
COL9A3-208ENST00000469802 MTMR7Q9Y216 660 aa19.21■□□□□ 0.67
COL9A3-208ENST00000469802 SLC16A2P36021 539 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 SYDE2Q5VT97 1194 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 ESR2Q92731 530 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 PRKAG2Q9UGJ0 569 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 CCPG1Q9ULG6 757 aa19.2■□□□□ 0.66
COL9A3-208ENST00000469802 MYADML2A6NDP7 307 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 ZNF213O14771 459 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
COL9A3-208ENST00000469802 ACLYP53396 1101 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 NKX3-2P78367 333 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 ZNF543Q08ER8 600 aa19.19■□□□□ 0.66
COL9A3-208ENST00000469802 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms