RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
PMPCB-207ENST00000469560 PTPRFP10586 1907 aa8.19□□□□□ -1.1
PMPCB-207ENST00000469560 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 PRPF3O43395 683 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SKIV2LQ15477 1246 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 EARS2Q5JPH6 523 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SLFN13Q68D06 897 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 PIBF1Q8WXW3 757 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 TNPO1Q92973 898 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 WNK4Q96J92 1243 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 P2RX7Q99572 595 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 JMJD4Q9H9V9 463 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 ORC3Q9UBD5 711 aaPredicted RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 STK36Q9NRP7 1315 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 WNT7AO00755 349 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 STX6O43752 255 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 EDIL3O43854 480 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 PEX10O60683 326 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 ASNSP08243 561 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SPP2Q13103 211 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 RESTQ13127 1097 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SUPT20HL1Q3ZLR7 823 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 ADGRF4Q8IZF3 695 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 GMCL1Q96IK5 515 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 PIGSQ96S52 555 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 SPZ1Q9BXG8 430 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 R3HDMLQ9H3Y0 253 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 CHMP5Q9NZZ3 219 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 KCNJ14Q9UNX9 436 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.18□□□□□ -1.1
PMPCB-207ENST00000469560 ZHX2Q9Y6X8 837 aa8.18□□□□□ -1.1
PMPCB-207ENST00000469560 PASKQ96RG2 1323 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 OPLAHO14841 1288 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 CALM1P0DP23 149 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 CALM2P0DP24 149 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 CALM3P0DP25 149 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 MTMR2Q13614 643 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
PMPCB-207ENST00000469560 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 BTNL9Q6UXG8 535 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 FERMT3Q86UX7 667 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 FBXO18Q8NFZ0 1043 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 TNFRSF25Q93038 417 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 ALG1Q9BT22 464 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
PMPCB-207ENST00000469560 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 ELP3Q9H9T3 547 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 VAT1LQ9HCJ6 419 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 CABP5Q9NP86 173 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 POLR3EQ9NVU0 708 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
PMPCB-207ENST00000469560 MYH6P13533 1939 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 ZNF536O15090 1300 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 TRIM75PA6NK02 468 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 M0R2N6 131 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 STXBP3O00186 592 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 HSP90AA1P07900 732 aaKnown RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 PARP1P09874 1014 aaKnown RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 ZSCAN22P10073 491 aaPredicted RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 BACE1P56817 501 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 MDM2Q00987 491 aaPredicted RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 SSRP1Q08945 709 aaKnown RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 IRF5Q13568 498 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 PFKFB3Q16875 520 aaPredicted RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 TREML2Q5T2D2 321 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 KRT40Q6A162 431 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 SYNE3Q6ZMZ3 975 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 ZNF280CQ8ND82 737 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 CTCFLQ8NI51 663 aaPredicted RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 DCAF4Q8WV16 495 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 FTOQ9C0B1 505 aaKnown RBP eCLIP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 RBM28Q9NW13 759 aaKnown RBP8.16□□□□□ -1.1
PMPCB-207ENST00000469560 LOC285556D6RIA3 1793 aa8.16□□□□□ -1.1
PMPCB-207ENST00000469560 SPDYE5A6NIY4 337 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 TMEM232C9JQI7 657 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 CPLX1O14810 134 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 F13A1P00488 732 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 BMP3P12645 472 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 VCAM1P19320 739 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 SLC1A4P43007 532 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 HMGCS2P54868 508 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 NR5A1Q13285 461 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 PPP2R5BQ15173 497 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
PMPCB-207ENST00000469560 ASPRV1Q53RT3 343 aa8.15□□□□□ -1.1
PMPCB-207ENST00000469560 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
PMPCB-207ENST00000469560 CLEC17AQ6ZS10 378 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms