RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 RASGRP2Q7LDG7 609 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 CCDC84Q86UT8 332 aaPredicted RBP6.15□□□□□ -1.42
ITGA6-208ENST00000469534 TICAM2Q86XR7 235 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 GPC2Q8N158 579 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 TMX3Q96JJ7 454 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 TRIM34Q9BYJ4 488 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 NCOA5Q9HCD5 579 aaKnown RBP6.15□□□□□ -1.42
ITGA6-208ENST00000469534 GGA3Q9NZ52 723 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 BRPF3Q9ULD4 1205 aa6.15□□□□□ -1.42
ITGA6-208ENST00000469534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.15□□□□□ -1.42
ITGA6-208ENST00000469534 ZMYM6O95789 1325 aa6.15□□□□□ -1.43
ITGA6-208ENST00000469534 GOLGA8BA8MQT2 603 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ESPNB1AK53 854 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 SH2B2O14492 632 aaPredicted RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RAD21O60216 631 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 SLC3A2P08195 630 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RASA1P20936 1047 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RPS12P25398 132 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 SHMT1P34896 483 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 EXOSC10Q01780 885 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 PTSQ03393 145 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 FMR1Q06787 632 aaKnown RBP eCLIP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 PDE4BQ07343 736 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RASA3Q14644 834 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ME3Q16798 604 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 TSGA10IPQ3SY00 556 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 GIMAP6Q6P9H5 292 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 TTC6Q86TZ1 520 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 MICU3Q86XE3 530 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ZNF444Q8N0Y2 327 aaPredicted RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 CMTR1Q8N1G2 835 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 NUP133Q8WUM0 1156 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 PIBF1Q8WXW3 757 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ESR2Q92731 530 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 SNX21Q969T3 373 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ZBED3Q96IU2 234 aaPredicted RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 CSRNP1Q96S65 589 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 UBAC1Q9BSL1 405 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 TM6SF1Q9BZW5 370 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 KRT23Q9C075 422 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 RNF41Q9H4P4 317 aaPredicted RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 DNAJC18Q9H819 358 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ANAPC4Q9UJX5 808 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 ISY1Q9ULR0 285 aaKnown RBP6.14□□□□□ -1.43
ITGA6-208ENST00000469534 TNKSO95271 1327 aa6.14□□□□□ -1.43
ITGA6-208ENST00000469534 OTOFQ9HC10 1997 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 CCDC69A6NI79 296 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 FIGNL2A6NMB9 653 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 JAK2O60674 1132 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 LILRA1O75019 489 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 TSPY3P0CV98 308 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 TSPY8P0CW00 308 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 EPHX2P34913 555 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 GSK3AP49840 483 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 JAG1P78504 1218 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 WTAPQ15007 396 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 NBPF20Q3BBV1 942 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 TMEM259Q4ZIN3 620 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 NBPF12Q5TAG4 269 aaPredicted RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 C16orf86Q6ZW13 317 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 LRRC47Q8N1G4 583 aaKnown RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 CCDC82Q8N4S0 544 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 GPR161Q8N6U8 529 aaKnown RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 KDF1Q8NAX2 398 aaPredicted RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 PNMA1Q8ND90 353 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 FAM151AQ8WW52 585 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 DPF2Q92785 391 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 IL17RAQ96F46 866 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 DDX11Q96FC9 970 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 ZSCAN10Q96SZ4 725 aaPredicted RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 MRIQ9BWK5 157 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 IDI2Q9BXS1 227 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 CNNM2Q9H8M5 875 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 RRAGCQ9HB90 399 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 LY9Q9HBG7 655 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 IL17RBQ9NRM6 502 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 TMPRSS4Q9NRS4 437 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 LIMCH1Q9UPQ0 1083 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 ROBO3Q96MS0 1386 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 SCN4AP35499 1836 aa6.13□□□□□ -1.43
ITGA6-208ENST00000469534 GREB1LQ9C091 1923 aaPredicted RBP6.13□□□□□ -1.43
ITGA6-208ENST00000469534 hCG_1642624A0A1W2PR95 340 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ERICH2A1L162 156 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 GLTPD2A6NH11 291 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 GOLGA8AA7E2F4 631 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 UBE2Q2LH0YL09 131 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ORC4O43929 436 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ENTPD3O75355 529 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 HMGB1P09429 215 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 PDIA3P30101 505 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 ADD1P35611 737 aaKnown RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 CTSOP43234 321 aaPredicted RBP6.12□□□□□ -1.43
ITGA6-208ENST00000469534 TNNI2P48788 182 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 GABPAQ06546 454 aa6.12□□□□□ -1.43
ITGA6-208ENST00000469534 SCRN1Q12765 414 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms