RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 ANKRD35Q8N283 1001 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 NYAP2Q9P242 653 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 CHD9Q3L8U1 2897 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 FGBP02675 491 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 ATP5JP18859 108 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 NKX3-2P78367 333 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 PANK1Q8TE04 598 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 KIFC2Q96AC6 838 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 HAUS7Q99871 368 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 KATNBL1Q9H079 304 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 PUS7LQ9H0K6 701 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 MTIF3Q9H2K0 278 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 SLC38A10Q9HBR0 1119 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 ARPP21Q9UBL0 812 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 YBX2Q9Y2T7 364 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 CTDP1Q9Y5B0 961 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 BDP1A6H8Y1 2624 aa15.37■□□□□ 0.05
TRAPPC12-216ENST00000469400 RASA1P20936 1047 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 BEX3Q00994 111 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 STK11IPQ8N1F8 1099 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 SLC43A3Q8NBI5 491 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 CHST13Q8NET6 341 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 HIPK3Q9H422 1215 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 FBXO40Q9UH90 709 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 UMODL1Q5DID0 1318 aa15.36■□□□□ 0.05
TRAPPC12-216ENST00000469400 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 SBK1Q52WX2 424 aa15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 MKNK2Q9HBH9 465 aa15.35■□□□□ 0.05
TRAPPC12-216ENST00000469400 RAB11FIP3O75154 756 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 PLA2G5P39877 138 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 RABGGTBP53611 331 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 OAZ1P54368 228 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 CCL23P55773 120 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 CNTN2Q02246 1040 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 TNFAIP2Q03169 654 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 NECAB3Q96P71 396 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 ASTN1O14525 1302 aa15.34■□□□□ 0.05
TRAPPC12-216ENST00000469400 IGKV6D-41A0A0C4DH26 115 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 HMMRO75330 724 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 CABYRO75952 493 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 ITGA7Q13683 1181 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 FAM133AQ8N9E0 248 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 MKL1Q969V6 931 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 FAM122AQ96E09 287 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 NOC4LQ9BVI4 516 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 TSPYL2Q9H2G4 693 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 HOMER2Q9NSB8 354 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 GNEQ9Y223 722 aaKnown RBP15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 GREB1LQ9C091 1923 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC12-216ENST00000469400 CHD7Q9P2D1 2997 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 GSG1L2A8MUP6 293 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 BMP1P13497 986 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 MYOGP15173 224 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 PTGS1P23219 599 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 FSCN1Q16658 493 aaKnown RBP15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 TLK2Q86UE8 772 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 MICALL1Q8N3F8 863 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 WNT8AQ9H1J5 351 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 SLC4A7Q9Y6M7 1214 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 MCM3APO60318 1980 aa15.32■□□□□ 0.04
TRAPPC12-216ENST00000469400 SOWAHBA6NEL2 793 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 DYNC1LI2O43237 492 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 B4GALT4O60513 344 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 SMPD1P17405 629 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 TFF2Q03403 129 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 RPUSD2Q8IZ73 545 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 GMCL1P1Q8NEA9 526 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 VWCEQ96DN2 955 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 AP5M1Q9H0R1 490 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 ACAD9Q9H845 621 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 MTMR4Q9NYA4 1195 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 SYNPO2Q9UMS6 1093 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 PCDHA11Q9Y5I1 949 aa15.31■□□□□ 0.04
TRAPPC12-216ENST00000469400 ASB14A6NK59 587 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZEB2O60315 1214 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms