RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF174Q15697 407 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 HS1BP3Q53T59 392 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 NEK8Q86SG6 692 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 UBA5Q9GZZ9 404 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 CSRNP2Q9H175 543 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 DNAJC25Q9H1X3 360 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 VAT1LQ9HCJ6 419 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 WDR90Q96KV7 1748 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 NDUFB10O96000 172 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 ASNSP08243 561 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 MCM7P33993 719 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 GMPSP49915 693 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-205ENST00000469129 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
SMC1A-205ENST00000469129 NLRP12P59046 1061 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 TPM4P67936 248 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-205ENST00000469129 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-205ENST00000469129 INF2Q27J81 1249 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 APOBEC3FQ8IUX4 373 aaKnown RBP10.62□□□□□ -0.71
SMC1A-205ENST00000469129 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 BPIFA3Q9BQP9 254 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 TMEM39BQ9GZU3 492 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 CBX8Q9HC52 389 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 CCDC39Q9UFE4 941 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 TUBE1Q9UJT0 475 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
SMC1A-205ENST00000469129 OTOFQ9HC10 1997 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 VWA3AA6NCI4 1184 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 BECN2A8MW95 431 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 F5H6K3 240 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 H7C1D1 291 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 NEMFO60524 1076 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 SMC2O95347 1197 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 VEGFAP15692 232 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-205ENST00000469129 MAP3K10Q02779 954 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 KLRC3Q07444 240 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 AP3B2Q13367 1082 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 POSTNQ15063 836 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 QRICH1Q2TAL8 776 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 KIF4BQ2VIQ3 1234 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 NBPF9Q3BBW0 867 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 C9orf131Q5VYM1 1079 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 DCAF15Q66K64 600 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 BTNL9Q6UXG8 535 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 AK8Q96MA6 479 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 AMNQ9BXJ7 453 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 TMX2Q9Y320 296 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 GJA3Q9Y6H8 435 aa10.61□□□□□ -0.71
SMC1A-205ENST00000469129 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 GOLGA6L6A8MZA4 724 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 POLR2DO15514 142 aaKnown RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 OR52Z1P0C646 297 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 GCFC2P16383 781 aaKnown RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 LMNB1P20700 586 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 CAP2P40123 477 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 STAT2P52630 851 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 TMEM266Q2M3C6 531 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 NOM1Q5C9Z4 860 aaKnown RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 TTBK2Q6IQ55 1244 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 DTHD1Q6ZMT9 781 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 FAM160B2Q86V87 743 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 ZNF526Q8TF50 670 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 SMARCE1Q969G3 411 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 COA7Q96BR5 231 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 RAB34Q9BZG1 259 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 RNF181Q9P0P0 153 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 CNOT7Q9UIV1 285 aaKnown RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 PPP2R3BQ9Y5P8 575 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 COL11A1P12107 1806 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-205ENST00000469129 PTPRFP10586 1907 aa10.6□□□□□ -0.71
SMC1A-205ENST00000469129 ZNF541Q9H0D2 1346 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 POLR2AP24928 1970 aaKnown RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SCN4AP35499 1836 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SMTNL1A8MU46 457 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 WNT7AO00755 349 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 ACTN4O43707 911 aaKnown RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 PLA2G6O60733 806 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 PTMAP06454 111 aaKnown RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 TPM3P06753 285 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SLFN14P0C7P3 912 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SLC16A2P36021 539 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 GRIN1Q05586 938 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 RASA3Q14644 834 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
SMC1A-205ENST00000469129 LETM2Q2VYF4 491 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 LONRF3Q496Y0 759 aa10.59□□□□□ -0.71
SMC1A-205ENST00000469129 JAKMIP3Q5VZ66 844 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms