RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TFAP4Q01664 338 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 ARMCX2Q7L311 632 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 CCDC144CPQ8IYA2 1237 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 PCSK9Q8NBP7 692 aaKnown RBP14.59□□□□□ -0.07
COL5A1-207ENST00000469093 GLT1D1Q96MS3 346 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 FBXO40Q9UH90 709 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 TBX21Q9UL17 535 aa14.59□□□□□ -0.07
COL5A1-207ENST00000469093 TMEM265A0A087WTH1 108 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-207ENST00000469093 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-207ENST00000469093 CTAGE5O15320 804 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 TSPY3P0CV98 308 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 TSPY8P0CW00 308 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 GJA9P57773 515 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 CNTN2Q02246 1040 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 LRRFIP1Q32MZ4 808 aaKnown RBP14.58□□□□□ -0.08
COL5A1-207ENST00000469093 GNASQ5JWF2 1037 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 MFSD5Q6N075 450 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 C16orf59Q7L2K0 433 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 VTI1AQ96AJ9 217 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 NACAP1Q9BZK3 213 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 KATNBL1Q9H079 304 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
COL5A1-207ENST00000469093 UNC80Q8N2C7 3258 aa14.58□□□□□ -0.08
COL5A1-207ENST00000469093 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 ARVCFO00192 962 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 FDX1P10109 184 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 NKX3-2P78367 333 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 PDE4BQ07343 736 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 PI4K2BQ8TCG2 481 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 STAG1Q8WVM7 1258 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 AGBL1Q96MI9 1066 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL5A1-207ENST00000469093 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 HOMER2Q9NSB8 354 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 ZNF536O15090 1300 aa14.57□□□□□ -0.08
COL5A1-207ENST00000469093 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
COL5A1-207ENST00000469093 FOSL2P15408 326 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 MCCP23508 829 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 PPARAQ07869 468 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 GRIN2CQ14957 1233 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 ZMYM1Q5SVZ6 1142 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 OTUD7AQ8TE49 926 aaPredicted RBP14.56□□□□□ -0.08
COL5A1-207ENST00000469093 CHURC1Q8WUH1 139 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 NAPBQ9H115 298 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 INCENPQ9NQS7 918 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 TTC41PQ6P2S7 1318 aa14.56□□□□□ -0.08
COL5A1-207ENST00000469093 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-207ENST00000469093 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.55□□□□□ -0.08
COL5A1-207ENST00000469093 SOWAHBA6NEL2 793 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 ERC2O15083 957 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 DNAJB2P25686 324 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 SLC1A4P43007 532 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 STAT2P52630 851 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 TNFAIP2Q03169 654 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 TMEM240Q5SV17 173 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 RCSD1Q6JBY9 416 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 FAM126BQ8IXS8 530 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 A1CFQ9NQ94 594 aaKnown RBP14.55□□□□□ -0.08
COL5A1-207ENST00000469093 IL17RBQ9NRM6 502 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 RNF146Q9NTX7 359 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 MYO9BQ13459 2157 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 MROH7Q68CQ1 1323 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 TTC28Q96AY4 2481 aa14.55□□□□□ -0.08
COL5A1-207ENST00000469093 FOXP2O15409 715 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 PLA2G6O60733 806 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 CSF2RAP15509 400 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 BEX3Q00994 111 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 PPIGQ13427 754 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL5A1-207ENST00000469093 TKFCQ3LXA3 575 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 RASIP1Q5U651 963 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
COL5A1-207ENST00000469093 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
COL5A1-207ENST00000469093 GNEQ9Y223 722 aaKnown RBP14.54□□□□□ -0.08
COL5A1-207ENST00000469093 ASTN1O14525 1302 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 MCM3APO60318 1980 aa14.54□□□□□ -0.08
COL5A1-207ENST00000469093 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 ASB14A6NK59 587 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 GRXCR1A8MXD5 290 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 NMT2O60551 498 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 CD4P01730 458 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 ACRP10323 421 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 ALAS1P13196 640 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 SNAP25P60880 206 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 CTDSPL2Q05D32 466 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-207ENST00000469093 CXCL17Q6UXB2 119 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 ZNF365Q70YC5 407 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 KCTD1Q719H9 257 aa14.53□□□□□ -0.08
COL5A1-207ENST00000469093 TMEM199Q8N511 208 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms