RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ADAM23O75077 832 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 ARNTP27540 789 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 ZNF76P36508 570 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 CRKLP46109 303 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 LIG3P49916 1009 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 FANCCQ00597 558 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 PDE3AQ14432 1141 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 LRRC14Q15048 493 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 TXNRD1Q16881 649 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 TTBK2Q6IQ55 1244 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 INTS5Q6P9B9 1019 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 KIF6Q6ZMV9 814 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 KIAA1211Q6ZU35 1233 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 PDZD3Q86UT5 571 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 TMEM130Q8N3G9 435 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 STK35Q8TDR2 534 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 DNAAF4Q8WXU2 420 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 ARHGAP45Q92619 1136 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 JARID2Q92833 1246 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 MYD88Q99836 296 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 PTPRCP08575 1304 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 ADAMTS7Q9UKP4 1686 aa5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-204ENST00000468545 C1QTNF9BB2RNN3 333 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 ECEL1O95672 775 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 CTSBP07858 339 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 BMP6P22004 513 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 CCT4P50991 539 aaKnown RBP5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 ZNF252P-AS1Q0IIN9 211 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 NEXNQ0ZGT2 675 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 PWP1Q13610 501 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 ADGRE1Q14246 886 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 MBTPS1Q14703 1052 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 MVPQ14764 893 aaKnown RBP5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 SCARA3Q6AZY7 606 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 LLGL2Q6P1M3 1020 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 KCPQ6ZWJ8 1503 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 ERMP1Q7Z2K6 904 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 DEFB132Q7Z7B7 95 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 CD163Q86VB7 1156 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 RSRP1Q9BUV0 290 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 RUSC1Q9BVN2 902 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 RNF208Q9H0X6 261 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 AKTIPQ9H8T0 292 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 CBX8Q9HC52 389 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 KRT82Q9NSB4 513 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 CYP8B1Q9UNU6 501 aa5.1□□□□□ -1.59
TMEM39A-204ENST00000468545 A0A087WZG4 1122 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 MEGF11A6BM72 1044 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 PLSCR1O15162 318 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 RPS6KA4O75676 772 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 DLGAP3O95886 979 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 FURINP09958 794 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 TCF3P15923 654 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 GPTP24298 496 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 IL6STP40189 918 aaPredicted RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 CHRNA4P43681 627 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 HLFQ16534 295 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 MAP3K11Q16584 847 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 CWF19L2Q2TBE0 894 aaKnown RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 EXOSC6Q5RKV6 272 aaKnown RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 BEND3Q5T5X7 828 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 RASIP1Q5U651 963 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 MAP1SQ66K74 1059 aaPredicted RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 ANKRD34AQ69YU3 496 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 AGMOQ6ZNB7 445 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 Q6ZS46 218 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 PLBD2Q8NHP8 589 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 RNF34Q969K3 372 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 CCDC136Q96JN2 1154 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 METTL22Q9BUU2 404 aaPredicted RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 TMPRSS13Q9BYE2 586 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 CCDC86Q9H6F5 360 aaKnown RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 CACNA2D2Q9NY47 1150 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 GGT7Q9UJ14 662 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 DDX19BQ9UMR2 479 aa5.09□□□□□ -1.59
TMEM39A-204ENST00000468545 C5P01031 1676 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 ADCY9O60503 1353 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 ABCC4O15439 1325 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 MAP3K15Q6ZN16 1313 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 SYNGAP1Q96PV0 1343 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 K7ELQ4 463 aaPredicted RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 LMNB1P20700 586 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 RFC4P35249 363 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 EIF5P55010 431 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 HDLBPQ00341 1268 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 INTS3Q68E01 1043 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 LRP10Q7Z4F1 713 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 TXNRD3Q86VQ6 643 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 SMG8Q8ND04 991 aaKnown RBP5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 PHC3Q8NDX5 983 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 GRIN3AQ8TCU5 1115 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 KCNB2Q92953 911 aa5.08□□□□□ -1.6
TMEM39A-204ENST00000468545 RHOVQ96L33 236 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms