RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 NT5C2P49902 561 aa16.29■□□□□ 0.2
SEC16A-208ENST00000467838 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
SEC16A-208ENST00000467838 CKAP4Q07065 602 aaKnown RBP16.29■□□□□ 0.2
SEC16A-208ENST00000467838 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
SEC16A-208ENST00000467838 TRIM10Q9UDY6 481 aa16.29■□□□□ 0.2
SEC16A-208ENST00000467838 ABCF2Q9UG63 623 aa16.29■□□□□ 0.2
SEC16A-208ENST00000467838 M0R2N6 131 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 KRT83P78385 493 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 MAP9Q49MG5 647 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 TTI2Q6NXR4 508 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 GIMAP8Q8ND71 665 aaPredicted RBP16.28■□□□□ 0.2
SEC16A-208ENST00000467838 GUCA1BQ9UMX6 200 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 SAR1BQ9Y6B6 198 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 FAM205AQ6ZU69 1335 aa16.28■□□□□ 0.2
SEC16A-208ENST00000467838 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 PRPF6O94906 941 aaKnown RBP16.27■□□□□ 0.2
SEC16A-208ENST00000467838 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.2
SEC16A-208ENST00000467838 DNM2P50570 870 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
SEC16A-208ENST00000467838 CDK17Q00537 523 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 BLIDQ8IZY5 108 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 DAGLBQ8NCG7 672 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
SEC16A-208ENST00000467838 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
SEC16A-208ENST00000467838 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
SEC16A-208ENST00000467838 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.19
SEC16A-208ENST00000467838 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 GYG1P46976 350 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 SBK1Q52WX2 424 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 BBXQ8WY36 941 aaPredicted RBP16.27■□□□□ 0.19
SEC16A-208ENST00000467838 NUP58Q9BVL2 599 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 RASSF4Q9H2L5 321 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 LCMT1Q9UIC8 334 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 PCDHA4Q9UN74 947 aa16.27■□□□□ 0.19
SEC16A-208ENST00000467838 RRP15Q9Y3B9 282 aaKnown RBP16.27■□□□□ 0.19
SEC16A-208ENST00000467838 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 USP17L21D6R901 530 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 PSMA7O14818 248 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 KCNQ2O43526 872 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 SYF2O95926 243 aaKnown RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 KIF5BP33176 963 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 STIM1Q13586 685 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 CCDC102AQ96A19 550 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 DHTKD1Q96HY7 919 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 HPCAL4Q9UM19 191 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 BAZ2BQ9UIF8 2168 aaKnown RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 KRT86O43790 486 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 ZNF572Q7Z3I7 529 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 RUBCNQ92622 972 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 DCP1AQ9NPI6 582 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
SEC16A-208ENST00000467838 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
SEC16A-208ENST00000467838 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 LAD1O00515 517 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 NMT2O60551 498 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 PRPHP41219 470 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
SEC16A-208ENST00000467838 COG1Q8WTW3 980 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 NSUN4Q96CB9 384 aaKnown RBP16.25■□□□□ 0.19
SEC16A-208ENST00000467838 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
SEC16A-208ENST00000467838 FAM204AQ9H8W3 233 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 MAPK8IP1Q9UQF2 711 aa16.25■□□□□ 0.19
SEC16A-208ENST00000467838 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 RNF40O75150 1001 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 ZBED6P86452 979 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 ITIH3Q06033 890 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 BSDC1Q9NW68 430 aaPredicted RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 FLT1P17948 1338 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 ENC1O14682 589 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 PPP1R2P41236 205 aa16.24■□□□□ 0.19
SEC16A-208ENST00000467838 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
SEC16A-208ENST00000467838 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms