RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TMEM151AQ8N4L1 468 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 FBXL6Q8N531 539 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 PRPF38AQ8NAV1 312 aaKnown RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 DTWD2Q8NBA8 298 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 TMEM145Q8NBT3 493 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 SYTL5Q8TDW5 730 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 LEO1Q8WVC0 666 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 Q96M66 194 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 MCMBPQ9BTE3 642 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 BRINP2Q9C0B6 783 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 ASCC2Q9H1I8 757 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 SLC52A2Q9HAB3 445 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 TPSG1Q9NRR2 321 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 WASH4PA8MWX3 477 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 SIGLEC6O43699 453 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 RASGRP1O95267 797 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 GDF11O95390 407 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 CD3EP07766 207 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 VIL1P09327 827 aaKnown RBP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 RBM10P98175 930 aaKnown RBP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 NFKB2Q00653 900 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 DUSP27Q5VZP5 1158 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 GPAT2Q6NUI2 795 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 KCNT2Q6UVM3 1135 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 FAM214BQ7L5A3 538 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 KRT26Q7Z3Y9 468 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 STRA8Q7Z7C7 330 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 DDX42Q86XP3 938 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 GPRC5CQ9NQ84 441 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 CHST7Q9NS84 486 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 DIS3Q9Y2L1 958 aaKnown RBP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 TNPO3Q9Y5L0 923 aaKnown RBP5.73□□□□□ -1.49
VPS13A-209ENST00000467124 ASXL2Q76L83 1435 aa5.73□□□□□ -1.49
VPS13A-209ENST00000467124 FAM170BA6NMN3 283 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 KPNA6O60684 536 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 CAPNS1P04632 268 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 STAT3P40763 770 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 CLCN7P51798 805 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 NEK4P51957 841 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 GFRA1P56159 465 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 AMPD2Q01433 879 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 CYP4F3Q08477 520 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 SCRN1Q12765 414 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 NMIQ13287 307 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 PCBP1Q15365 356 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 FNDC3BQ53EP0 1204 aaKnown RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 DENND5AQ6IQ26 1287 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 LRRTM3Q86VH5 581 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 HEXIM2Q96MH2 286 aaKnown RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 MRPL4Q9BYD3 311 aaKnown RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 GPR62Q9BZJ7 368 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 TRIT1Q9H3H1 467 aaKnown RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 TRIM39Q9HCM9 518 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 ATP8A1Q9Y2Q0 1164 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 SF3B6Q9Y3B4 125 aaKnown RBP5.72□□□□□ -1.49
VPS13A-209ENST00000467124 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 U3KQE9 123 aa5.72□□□□□ -1.49
VPS13A-209ENST00000467124 OPA1O60313 960 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 RFPL3O75679 317 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 IGLV1-40P01703 118 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 IFNGR1P15260 489 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 FSTP19883 344 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 ENDOUP21128 410 aaKnown RBP5.71□□□□□ -1.5
VPS13A-209ENST00000467124 CTSKP43235 329 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 STRN3Q13033 797 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 CLEC16AQ2KHT3 1053 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 CDKAL1Q5VV42 579 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 ZNF765Q7L2R6 523 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 THAP5Q7Z6K1 395 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 RNF180Q86T96 592 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 FERMT3Q86UX7 667 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 FAM181AQ8N9Y4 354 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 SCLYQ96I15 445 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 MFSD14AQ96MC6 490 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 CCDC140Q96MF4 163 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 NKX2-4Q9H2Z4 354 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 CAAP1Q9H8G2 361 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 ATG3Q9NT62 314 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 PCDHA9Q9Y5H5 950 aa5.71□□□□□ -1.5
VPS13A-209ENST00000467124 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-209ENST00000467124 IGHA1P01876 353 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 S100BP04271 92 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-209ENST00000467124 F13BP05160 661 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 GSNP06396 782 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 CEACAM5P06731 702 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 ITIH2P19823 946 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 SOX5P35711 763 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 TNK2Q07912 1038 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 SKOR2Q2VWA4 1001 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-209ENST00000467124 LHFPL2Q6ZUX7 228 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 ZNF655Q8N720 491 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-209ENST00000467124 DAGLBQ8NCG7 672 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 OSBPL1AQ9BXW6 950 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 HOMER2Q9NSB8 354 aa5.7□□□□□ -1.5
VPS13A-209ENST00000467124 GPATCH2Q9NW75 528 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms