RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NAT16Q8N8M0 369 aa7.52□□□□□ -1.21
XRN1-206ENST00000467077 C1QTNF3-AMACRE9PGA6 284 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 MEIS1O00470 390 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 ZNF205O95201 554 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 PF4P02776 101 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 BMP8BP34820 402 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 GDF5P43026 501 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 ST13P50502 369 aaKnown RBP7.51□□□□□ -1.21
XRN1-206ENST00000467077 KRTAP1-1Q07627 177 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 TAF1CQ15572 869 aaPredicted RBP7.51□□□□□ -1.21
XRN1-206ENST00000467077 ARSHQ5FYA8 562 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 PAQR3Q6TCH7 311 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 LOXL4Q96JB6 756 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 JMJD8Q96S16 334 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 RNF38Q9H0F5 515 aa7.51□□□□□ -1.21
XRN1-206ENST00000467077 CYBBP04839 570 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 MPP2Q14168 576 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 TTC9BQ8N6N2 239 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
XRN1-206ENST00000467077 LNPKQ9C0E8 428 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 DUSP10Q9Y6W6 482 aa7.5□□□□□ -1.21
XRN1-206ENST00000467077 F6X3S4 739 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 SRGAP3O43295 1099 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 BRD1O95696 1058 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 C6P13671 934 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 CARFQ8N187 725 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 DUSP9Q99956 384 aaKnown RBP7.49□□□□□ -1.21
XRN1-206ENST00000467077 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
XRN1-206ENST00000467077 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
XRN1-206ENST00000467077 NOBOXO60393 691 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 CLEC3AO75596 197 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 DBHP09172 617 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 ZNF20P17024 532 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 HTRA3P83110 453 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 REC114Q7Z4M0 266 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 SAMD11Q96NU1 681 aa7.48□□□□□ -1.21
XRN1-206ENST00000467077 MKRN2Q9H000 416 aaKnown RBP7.48□□□□□ -1.21
XRN1-206ENST00000467077 NCAM1P13591 858 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 FBLN1P23142 703 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 CHST13Q8NET6 341 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 ZNF512BQ96KM6 892 aaPredicted RBP7.47□□□□□ -1.21
XRN1-206ENST00000467077 C1QTNF3Q9BXJ4 246 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 GFOD1Q9NXC2 390 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 GMIPQ9P107 970 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 PCDHB12Q9Y5F1 795 aa7.47□□□□□ -1.21
XRN1-206ENST00000467077 ATF2P15336 505 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 TACR2P21452 398 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 GBP2P32456 591 aaPredicted RBP7.46□□□□□ -1.22
XRN1-206ENST00000467077 MVKQ03426 396 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 HLA-DQA1Q5Y7H0 255 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 RHOVQ96L33 236 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 NTMQ9P121 344 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 FBXL21Q9UKT6 434 aa7.46□□□□□ -1.22
XRN1-206ENST00000467077 PWP1Q13610 501 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 CRTC3Q6UUV7 619 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 RELL1Q8IUW5 271 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 ALG3Q92685 438 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 RBM15Q96T37 977 aaKnown RBP eCLIP7.45□□□□□ -1.22
XRN1-206ENST00000467077 MENTQ9BUN1 341 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 MRIQ9BWK5 157 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 SCAND2PQ9GZW5 306 aaPredicted RBP7.45□□□□□ -1.22
XRN1-206ENST00000467077 HCFC2Q9Y5Z7 792 aa7.45□□□□□ -1.22
XRN1-206ENST00000467077 VAV1P15498 845 aa7.44□□□□□ -1.22
XRN1-206ENST00000467077 POLR2BP30876 1174 aaKnown RBP7.44□□□□□ -1.22
XRN1-206ENST00000467077 FAM160A1Q05DH4 1040 aa7.44□□□□□ -1.22
XRN1-206ENST00000467077 CWF19L2Q2TBE0 894 aaKnown RBP7.44□□□□□ -1.22
XRN1-206ENST00000467077 GOLM1Q8NBJ4 401 aa7.44□□□□□ -1.22
XRN1-206ENST00000467077 DSCC1Q9BVC3 393 aa7.44□□□□□ -1.22
XRN1-206ENST00000467077 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
XRN1-206ENST00000467077 F8W031 263 aaPredicted RBP7.43□□□□□ -1.22
XRN1-206ENST00000467077 CYR61O00622 381 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 MC3RP41968 323 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 CTSKP43235 329 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 SARSP49591 514 aaKnown RBP7.43□□□□□ -1.22
XRN1-206ENST00000467077 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
XRN1-206ENST00000467077 PRR5P85299 388 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 DLX2Q07687 328 aaPredicted RBP7.43□□□□□ -1.22
XRN1-206ENST00000467077 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 CYP2R1Q6VVX0 501 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 USP51Q70EK9 711 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 TMEM74Q96NL1 305 aa7.43□□□□□ -1.22
XRN1-206ENST00000467077 PLATP00750 562 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 GSNP06396 782 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 CCNFP41002 786 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 PSMD2Q13200 908 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 CWF19L1Q69YN2 538 aaKnown RBP7.42□□□□□ -1.22
XRN1-206ENST00000467077 TTLL7Q6ZT98 887 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 B3GNT8Q7Z7M8 397 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 DVL3Q92997 716 aaPredicted RBP7.42□□□□□ -1.22
XRN1-206ENST00000467077 SLITRK6Q9H5Y7 841 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 RNF19AQ9NV58 838 aa7.42□□□□□ -1.22
XRN1-206ENST00000467077 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms