RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
SNED1-208ENST00000466618 NRDCO43847 1150 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 RANBP6O60518 1105 aaKnown RBP17.46■□□□□ 0.39
SNED1-208ENST00000466618 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
SNED1-208ENST00000466618 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
SNED1-208ENST00000466618 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 DHX32Q7L7V1 743 aaKnown RBP17.46■□□□□ 0.39
SNED1-208ENST00000466618 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 ARFGAP3Q9NP61 516 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 TOMM22Q9NS69 142 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 FZD1Q9UP38 647 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 PLIN4Q96Q06 1357 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 AKR1B1P15121 316 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 TFAP4Q01664 338 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 PARD6BQ9BYG5 372 aa17.46■□□□□ 0.39
SNED1-208ENST00000466618 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 CAP2P40123 477 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 NCAPHQ15003 741 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
SNED1-208ENST00000466618 PACS2Q86VP3 889 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 FMR1NBQ8N0W7 255 aaPredicted RBP17.45■□□□□ 0.38
SNED1-208ENST00000466618 TCP11L1Q9NUJ3 509 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 TSPY2A6NKD2 308 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 TOMM70O94826 608 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 NF2P35240 595 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 NOVP48745 357 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNED1-208ENST00000466618 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
SNED1-208ENST00000466618 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 MAP2K7O14733 419 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
SNED1-208ENST00000466618 GUCY1A2P33402 732 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 CHST3Q7LGC8 479 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 FBXL16Q8N461 479 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 RBM46Q8TBY0 533 aaKnown RBP17.44■□□□□ 0.38
SNED1-208ENST00000466618 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
SNED1-208ENST00000466618 PRC1O43663 620 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
SNED1-208ENST00000466618 GDF11O95390 407 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 TSPY3P0CV98 308 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 TSPY8P0CW00 308 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 GUCY2CP25092 1073 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 INPP5BP32019 993 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 LONRF2Q1L5Z9 754 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 ABCB5Q2M3G0 1257 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 IGDCC4Q8TDY8 1250 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 PPP2R3AQ06190 1150 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 FOXR1Q6PIV2 292 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 GOLGA6L1Q8N7Z2 621 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 WRNIP1Q96S55 665 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 AGXT2Q9BYV1 514 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 KIAA1468Q9P260 1216 aa17.43■□□□□ 0.38
SNED1-208ENST00000466618 NMT2O60551 498 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 RPS6KA5O75582 802 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 GH2P01242 217 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 MAGEA9P43362 315 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 SCRN1Q12765 414 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 PRKG1Q13976 671 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 SEC23AQ15436 765 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 NOL9Q5SY16 702 aaKnown RBP17.42■□□□□ 0.38
SNED1-208ENST00000466618 CST9Q5W186 159 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 TMEM179Q6ZVK1 233 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 RABGGTAQ92696 567 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
SNED1-208ENST00000466618 JRKLQ9Y4A0 524 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 IVLP07476 585 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 FOSBP53539 338 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 FANCCQ00597 558 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
SNED1-208ENST00000466618 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 WDR24Q96S15 920 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 HSD3B7Q9H2F3 369 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 ZBTB21Q9ULJ3 1066 aa17.42■□□□□ 0.38
SNED1-208ENST00000466618 LOC102724159A0A0B4J2E5 919 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 FKBP1BP68106 108 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 GNL2Q13823 731 aaKnown RBP17.41■□□□□ 0.38
SNED1-208ENST00000466618 PWP2Q15269 919 aaKnown RBP17.41■□□□□ 0.38
SNED1-208ENST00000466618 TTC31Q49AM3 519 aaPredicted RBP17.41■□□□□ 0.38
SNED1-208ENST00000466618 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 RCSD1Q6JBY9 416 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 IQCA1Q86XH1 822 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
SNED1-208ENST00000466618 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
SNED1-208ENST00000466618 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
SNED1-208ENST00000466618 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms