RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 TSEN34Q9BSV6 310 aaKnown RBP20.5■□□□□ 0.87
CYTH3-205ENST00000466543 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 IL17RBQ9NRM6 502 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 HOMER2Q9NSB8 354 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
CYTH3-205ENST00000466543 LCTP09848 1927 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 DUSP11O75319 330 aaKnown RBP20.49■□□□□ 0.87
CYTH3-205ENST00000466543 OAZ1P54368 228 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 SNAP25P60880 206 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 CTDSPL2Q05D32 466 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 PDE4BQ07343 736 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 ANKRD33Q7Z3H0 272 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 AGBL1Q96MI9 1066 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 TTYH1Q9H313 450 aaPredicted RBP20.49■□□□□ 0.87
CYTH3-205ENST00000466543 LRRC37A2A6NM11 1700 aa20.49■□□□□ 0.87
CYTH3-205ENST00000466543 CTAGE5O15320 804 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 PTGS1P23219 599 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 LRRFIP1Q32MZ4 808 aaKnown RBP20.48■□□□□ 0.87
CYTH3-205ENST00000466543 CCDC144BQ3MJ40 725 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 CHST13Q8NET6 341 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 GMCL1Q96IK5 515 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 STARD7Q9NQZ5 370 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 CTDP1Q9Y5B0 961 aaPredicted RBP20.48■□□□□ 0.87
CYTH3-205ENST00000466543 ASTN1O14525 1302 aa20.48■□□□□ 0.87
CYTH3-205ENST00000466543 SOWAHBA6NEL2 793 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 MCCP23508 829 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 CST5P28325 142 aaPredicted RBP20.47■□□□□ 0.87
CYTH3-205ENST00000466543 STAT2P52630 851 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 ZNF697Q5TEC3 545 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 KCTD1Q719H9 257 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 CDX2Q99626 313 aaPredicted RBP20.47■□□□□ 0.87
CYTH3-205ENST00000466543 UPF3AQ9H1J1 476 aaKnown RBP20.47■□□□□ 0.87
CYTH3-205ENST00000466543 SEMA6BQ9H3T3 888 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 A1CFQ9NQ94 594 aaKnown RBP20.47■□□□□ 0.87
CYTH3-205ENST00000466543 TMEM39AQ9NV64 488 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 FBXO40Q9UH90 709 aa20.47■□□□□ 0.87
CYTH3-205ENST00000466543 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.46■□□□□ 0.87
CYTH3-205ENST00000466543 MOXD2PA6NHM9 499 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
CYTH3-205ENST00000466543 RAG1P15918 1043 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 TOX2Q96NM4 488 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 ABHD16BQ9H3Z7 469 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 RNF146Q9NTX7 359 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 TBX21Q9UL17 535 aa20.46■□□□□ 0.87
CYTH3-205ENST00000466543 ISY1Q9ULR0 285 aaKnown RBP20.46■□□□□ 0.87
CYTH3-205ENST00000466543 ASGR1P07306 291 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 SLC3A2P08195 630 aaKnown RBP20.45■□□□□ 0.86
CYTH3-205ENST00000466543 SLC1A4P43007 532 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 CDK7P50613 346 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 RRP1P56182 461 aaKnown RBP20.45■□□□□ 0.86
CYTH3-205ENST00000466543 GJA9P57773 515 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
CYTH3-205ENST00000466543 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 STX8Q9UNK0 236 aa20.45■□□□□ 0.86
CYTH3-205ENST00000466543 NOVP48745 357 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 RNPC3Q96LT9 517 aaKnown RBP20.44■□□□□ 0.86
CYTH3-205ENST00000466543 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 ACAD9Q9H845 621 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
CYTH3-205ENST00000466543 SPTBN5Q9NRC6 3674 aaKnown RBP20.44■□□□□ 0.86
CYTH3-205ENST00000466543 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 DCDC2CA8MYV0 355 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 BEX3Q00994 111 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 FPGSQ05932 587 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 ANKRD45Q5TZF3 282 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 RCSD1Q6JBY9 416 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 MYLIPQ8WY64 445 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 FAM227BQ96M60 508 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
CYTH3-205ENST00000466543 ANAPC4Q9UJX5 808 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
CYTH3-205ENST00000466543 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 PLA2G6O60733 806 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 FDX1P10109 184 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 ALAS1P13196 640 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 IKQ13123 557 aaPredicted RBP20.42■□□□□ 0.86
CYTH3-205ENST00000466543 GNASQ5JWF2 1037 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 C16orf59Q7L2K0 433 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.42■□□□□ 0.86
CYTH3-205ENST00000466543 GLT1D1Q96MS3 346 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 ELP1O95163 1332 aa20.42■□□□□ 0.86
CYTH3-205ENST00000466543 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
CYTH3-205ENST00000466543 TIMP1P01033 207 aa20.41■□□□□ 0.86
CYTH3-205ENST00000466543 FGRP09769 529 aa20.41■□□□□ 0.86
CYTH3-205ENST00000466543 PDE1AP54750 535 aa20.41■□□□□ 0.86
CYTH3-205ENST00000466543 NKX3-2P78367 333 aa20.41■□□□□ 0.86
CYTH3-205ENST00000466543 COL25A1Q9BXS0 654 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms