RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 TBC1D9BQ66K14 1250 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 ATG9AQ7Z3C6 839 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 CHD1LQ86WJ1 897 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 FLAD1Q8NFF5 587 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 STAP2Q9UGK3 403 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 ZNF652Q9Y2D9 606 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 PPME1Q9Y570 386 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 TAF1P21675 1872 aa7.61□□□□□ -1.19
PSME4-204ENST00000466539 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
PSME4-204ENST00000466539 CARMIL3Q8ND23 1372 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 ABCC12Q96J65 1359 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 SH3TC1Q8TE82 1336 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 A0A096LPE4 126 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 A0A1W2PPZ6 126 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 SRGAP3O43295 1099 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 CIAO1O76071 339 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 RASSF7Q02833 373 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 NFIXQ14938 502 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 GRIK4Q16099 956 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 CRY2Q49AN0 593 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 ALG1LQ6GMV1 187 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 SMIM5Q71RC9 77 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 FMR1NBQ8N0W7 255 aaPredicted RBP7.6□□□□□ -1.19
PSME4-204ENST00000466539 SYNE4Q8N205 404 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 VGLL2Q8N8G2 317 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 FBF1Q8TES7 1133 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 FAM89AQ96GI7 184 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 DUSP9Q99956 384 aaKnown RBP7.6□□□□□ -1.19
PSME4-204ENST00000466539 GPR108Q9NPR9 543 aa7.6□□□□□ -1.19
PSME4-204ENST00000466539 SRP68Q9UHB9 627 aaKnown RBP7.6□□□□□ -1.19
PSME4-204ENST00000466539 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 AOX1Q06278 1338 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 KRBA1A5PL33 1030 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 PDE8AO60658 829 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 PRPF40AO75400 957 aaKnown RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 ERCC3P19447 782 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 CTSWP56202 376 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 EZH2Q15910 746 aaKnown RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 SLC15A2Q16348 729 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 HSP90AB4PQ58FF6 505 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 PRPF40BQ6NWY9 871 aaKnown RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 LMBR1LQ6UX01 489 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 COL23A1Q86Y22 540 aaPredicted RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 TMEM151AQ8N4L1 468 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 UTP14AQ9BVJ6 771 aaKnown RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 NIP7Q9Y221 180 aaKnown RBP eCLIP7.59□□□□□ -1.19
PSME4-204ENST00000466539 RIPOR2Q9Y4F9 1068 aa7.59□□□□□ -1.19
PSME4-204ENST00000466539 BRCA1P38398 1863 aaKnown RBP7.59□□□□□ -1.19
PSME4-204ENST00000466539 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 POLRMTO00411 1230 aaKnown RBP7.58□□□□□ -1.2
PSME4-204ENST00000466539 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
PSME4-204ENST00000466539 GPTP24298 496 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 ATP2B2Q01814 1243 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 DDR1Q08345 913 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 ZNF423Q2M1K9 1284 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 SKAP1Q86WV1 359 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 CACTIN-AS1Q8N1I8 211 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 RGS22Q8NE09 1264 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 KIF1BPQ96EK5 621 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 NOP53Q9NZM5 478 aaKnown RBP7.58□□□□□ -1.2
PSME4-204ENST00000466539 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
PSME4-204ENST00000466539 EXOC6BQ9Y2D4 811 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 ZNF609O15014 1411 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 SNED1Q8TER0 1413 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 AK9Q5TCS8 1911 aa7.58□□□□□ -1.2
PSME4-204ENST00000466539 DOCK2Q92608 1830 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 EYA2O00167 538 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 PIK3R2O00459 728 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 FSCN2O14926 492 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 ITGB2P05107 769 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 HSP90B1P14625 803 aaKnown RBP7.57□□□□□ -1.2
PSME4-204ENST00000466539 ITPKAP23677 461 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 HOXA10P31260 410 aaPredicted RBP7.57□□□□□ -1.2
PSME4-204ENST00000466539 RFC4P35249 363 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 FCGRTP55899 365 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 BMP2KLQ5H9B9 411 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 ERC1Q8IUD2 1116 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 NLGN1Q8N2Q7 840 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 JARID2Q92833 1246 aaPredicted RBP7.57□□□□□ -1.2
PSME4-204ENST00000466539 KLHDC7BQ96G42 594 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 LRRCC1Q9C099 1032 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 NYXQ9GZU5 481 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 GREM2Q9H772 168 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 KCNK4Q9NYG8 393 aa7.57□□□□□ -1.2
PSME4-204ENST00000466539 PA2G4Q9UQ80 394 aaKnown RBP7.57□□□□□ -1.2
PSME4-204ENST00000466539 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
PSME4-204ENST00000466539 IRS2Q9Y4H2 1338 aa7.56□□□□□ -1.2
PSME4-204ENST00000466539 H3BRJ5 948 aa7.56□□□□□ -1.2
PSME4-204ENST00000466539 DLL1O00548 723 aa7.56□□□□□ -1.2
PSME4-204ENST00000466539 DDX3YO15523 660 aaKnown RBP7.56□□□□□ -1.2
PSME4-204ENST00000466539 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms