RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 METTL16Q86W50 562 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 EDC3Q96F86 508 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 NUDT12Q9BQG2 462 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 PUS7LQ9H0K6 701 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 NAPBQ9H115 298 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 ARMT1Q9H993 441 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 DCP1AQ9NPI6 582 aaPredicted RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 MCM9Q9NXL9 1143 aa8.22□□□□□ -1.09
CLDN4-204ENST00000466411 DDX20Q9UHI6 824 aaKnown RBP8.22□□□□□ -1.09
CLDN4-204ENST00000466411 FAM186AA6NE01 2351 aa8.21□□□□□ -1.09
CLDN4-204ENST00000466411 SMCHD1A6NHR9 2005 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 LOC285556D6RIA3 1793 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 PEX10O60683 326 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 CTNND1O60716 968 aaKnown RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 REC8O95072 547 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 ASNSP08243 561 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 GSPT1P15170 499 aaKnown RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 ZKSCAN1P17029 563 aaPredicted RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 PDE4BQ07343 736 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TCP10Q12799 353 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 NFIAQ12857 509 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TMEM132AQ24JP5 1023 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 GJC2Q5T442 439 aaPredicted RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 CWC27Q6UX04 472 aaKnown RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 MAPKAPK5Q8IW41 473 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 SCYL3Q8IZE3 742 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 LCORLQ8N3X6 602 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TRPV1Q8NER1 839 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 OSBP2Q969R2 916 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 ZDHHC16Q969W1 377 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 DSCC1Q9BVC3 393 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 ADAM33Q9BZ11 813 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 RNF41Q9H4P4 317 aaPredicted RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 SH2D4AQ9H788 454 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TXNRD2Q9NNW7 524 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 LHX6Q9UPM6 363 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 YBX2Q9Y2T7 364 aaKnown RBP8.21□□□□□ -1.1
CLDN4-204ENST00000466411 TACC3Q9Y6A5 838 aa8.21□□□□□ -1.1
CLDN4-204ENST00000466411 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 CHD8Q9HCK8 2581 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 SIPA1L1O43166 1804 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 CHMLP26374 656 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 DYNLL1P63167 89 aaKnown RBP8.2□□□□□ -1.1
CLDN4-204ENST00000466411 FPGSQ05932 587 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 PDE4DQ08499 809 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
CLDN4-204ENST00000466411 Q3C1V9 767 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 ERMP1Q7Z2K6 904 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 ZFPM1Q8IX07 1006 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 SOCS4Q8WXH5 440 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 CCDC17Q96LX7 622 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 CNNM2Q9H8M5 875 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 AS3MTQ9HBK9 375 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 CABP5Q9NP86 173 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 DDX4Q9NQI0 724 aaKnown RBP8.2□□□□□ -1.1
CLDN4-204ENST00000466411 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
CLDN4-204ENST00000466411 COG5Q9UP83 839 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 TECTAO75443 2155 aa8.2□□□□□ -1.1
CLDN4-204ENST00000466411 A0A0D9SFI3 127 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 GSG1L2A8MUP6 293 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 M0R2C6 588 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 MSCO60682 206 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 SLURP2P0DP57 97 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 IMMTQ16891 758 aaKnown RBP8.19□□□□□ -1.1
CLDN4-204ENST00000466411 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 C12orf60Q5U649 245 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
CLDN4-204ENST00000466411 FAM178BQ8IXR5 827 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 IFNL3Q8IZI9 196 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
CLDN4-204ENST00000466411 PRSS33Q8NF86 280 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 SDR42E1Q8WUS8 393 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 UIMC1Q96RL1 719 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 ASCC2Q9H1I8 757 aaPredicted RBP8.19□□□□□ -1.1
CLDN4-204ENST00000466411 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 ALG13Q9NP73 1137 aaKnown RBP8.19□□□□□ -1.1
CLDN4-204ENST00000466411 ANAPC4Q9UJX5 808 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 SYNPO2Q9UMS6 1093 aa8.19□□□□□ -1.1
CLDN4-204ENST00000466411 DDTLA6NHG4 134 aaPredicted RBP8.18□□□□□ -1.1
CLDN4-204ENST00000466411 TRIM75PA6NK02 468 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 SNPHO15079 494 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 SGSM2O43147 1006 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 CLTBP09497 229 aa8.18□□□□□ -1.1
CLDN4-204ENST00000466411 HSPD1P10809 573 aaKnown RBP8.18□□□□□ -1.1
CLDN4-204ENST00000466411 HOXB1P14653 301 aaPredicted RBP8.18□□□□□ -1.1
CLDN4-204ENST00000466411 ADCYAP1R1P41586 468 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms