RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 AGBL1Q96MI9 1066 aa24.51■■□□□ 1.51
COL6A1-203ENST00000466285 ERC2O15083 957 aa24.5■■□□□ 1.51
COL6A1-203ENST00000466285 KCTD1Q719H9 257 aa24.5■■□□□ 1.51
COL6A1-203ENST00000466285 ARMCX2Q7L311 632 aa24.5■■□□□ 1.51
COL6A1-203ENST00000466285 TTYH1Q9H313 450 aaPredicted RBP24.5■■□□□ 1.51
COL6A1-203ENST00000466285 ISY1Q9ULR0 285 aaKnown RBP24.5■■□□□ 1.51
COL6A1-203ENST00000466285 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.49■■□□□ 1.51
COL6A1-203ENST00000466285 CTAGE5O15320 804 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 MCCP23508 829 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 FAAP100Q0VG06 881 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 ACVR2BQ13705 512 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 KCNA10Q16322 511 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 ANKRD35Q8N283 1001 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 NACAP1Q9BZK3 213 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 VCANP13611 3396 aa24.49■■□□□ 1.51
COL6A1-203ENST00000466285 SOWAHBA6NEL2 793 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 KIAA0355O15063 1070 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 PDE4BQ07343 736 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 CCDC144BQ3MJ40 725 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 FAM109BQ6ICB4 259 aaPredicted RBP24.48■■□□□ 1.51
COL6A1-203ENST00000466285 ZNF467Q7Z7K2 595 aaPredicted RBP24.48■■□□□ 1.51
COL6A1-203ENST00000466285 CCDC144CPQ8IYA2 1237 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 MSL3Q8N5Y2 521 aaKnown RBP24.48■■□□□ 1.51
COL6A1-203ENST00000466285 FAM227BQ96M60 508 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 PURBQ96QR8 312 aaKnown RBP24.48■■□□□ 1.51
COL6A1-203ENST00000466285 A1CFQ9NQ94 594 aaKnown RBP24.48■■□□□ 1.51
COL6A1-203ENST00000466285 STARD7Q9NQZ5 370 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 RNF146Q9NTX7 359 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 FAM184BQ9ULE4 1060 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 SYNPO2Q9UMS6 1093 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 MTMR7Q9Y216 660 aa24.48■■□□□ 1.51
COL6A1-203ENST00000466285 A0A0D9SFI3 127 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 MUM1L1Q5H9M0 696 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 TMEM63BQ5T3F8 832 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 FAM133AQ8N9E0 248 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 GMCL1Q96IK5 515 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 ZNF287Q9HBT7 754 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 LAMA4Q16363 1823 aa24.47■■□□□ 1.51
COL6A1-203ENST00000466285 DUSP11O75319 330 aaKnown RBP24.46■■□□□ 1.51
COL6A1-203ENST00000466285 STAT2P52630 851 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 OAZ1P54368 228 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 ZNF697Q5TEC3 545 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 CCDC174Q6PII3 467 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 CHST13Q8NET6 341 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 UPF3AQ9H1J1 476 aaKnown RBP24.46■■□□□ 1.51
COL6A1-203ENST00000466285 STX8Q9UNK0 236 aa24.46■■□□□ 1.51
COL6A1-203ENST00000466285 CTDP1Q9Y5B0 961 aaPredicted RBP24.46■■□□□ 1.51
COL6A1-203ENST00000466285 C6orf222P0C671 652 aaPredicted RBP24.45■■□□□ 1.5
COL6A1-203ENST00000466285 CST5P28325 142 aaPredicted RBP24.45■■□□□ 1.5
COL6A1-203ENST00000466285 SLC1A4P43007 532 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 ANKRD45Q5TZF3 282 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 ANKRD33Q7Z3H0 272 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 CDX2Q99626 313 aaPredicted RBP24.45■■□□□ 1.5
COL6A1-203ENST00000466285 TSEN34Q9BSV6 310 aaKnown RBP24.45■■□□□ 1.5
COL6A1-203ENST00000466285 ACAD9Q9H845 621 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 TBX21Q9UL17 535 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 GBF1Q92538 1859 aa24.45■■□□□ 1.5
COL6A1-203ENST00000466285 TSPY2A6NKD2 308 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 ASGR1P07306 291 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 RAG1P15918 1043 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 BEX3Q00994 111 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 TTBK2Q6IQ55 1244 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 ZNF589Q86UQ0 364 aaPredicted RBP24.44■■□□□ 1.5
COL6A1-203ENST00000466285 STAG1Q8WVM7 1258 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 TMEM39AQ9NV64 488 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 FBXO40Q9UH90 709 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 PRR12Q9ULL5 1215 aa24.44■■□□□ 1.5
COL6A1-203ENST00000466285 SPTBN5Q9NRC6 3674 aaKnown RBP24.43■■□□□ 1.5
COL6A1-203ENST00000466285 ALAS1P13196 640 aa24.43■■□□□ 1.5
COL6A1-203ENST00000466285 PDE1AP54750 535 aa24.43■■□□□ 1.5
COL6A1-203ENST00000466285 IKQ13123 557 aaPredicted RBP24.43■■□□□ 1.5
COL6A1-203ENST00000466285 LRRFIP1Q32MZ4 808 aaKnown RBP24.43■■□□□ 1.5
COL6A1-203ENST00000466285 RNPC3Q96LT9 517 aaKnown RBP24.43■■□□□ 1.5
COL6A1-203ENST00000466285 ABHD16BQ9H3Z7 469 aa24.43■■□□□ 1.5
COL6A1-203ENST00000466285 MOXD2PA6NHM9 499 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 NOVP48745 357 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 GJA9P57773 515 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 MYLIPQ8WY64 445 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 SEMA6BQ9H3T3 888 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 PDGFCQ9NRA1 345 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 ANAPC4Q9UJX5 808 aa24.42■■□□□ 1.5
COL6A1-203ENST00000466285 RANBP6O60518 1105 aaKnown RBP24.41■■□□□ 1.5
COL6A1-203ENST00000466285 SLC3A2P08195 630 aaKnown RBP24.41■■□□□ 1.5
COL6A1-203ENST00000466285 SLC16A2P36021 539 aa24.41■■□□□ 1.5
COL6A1-203ENST00000466285 CDK7P50613 346 aa24.41■■□□□ 1.5
COL6A1-203ENST00000466285 SMAD3P84022 425 aaKnown RBP24.41■■□□□ 1.5
COL6A1-203ENST00000466285 FPGSQ05932 587 aa24.41■■□□□ 1.5
COL6A1-203ENST00000466285 FAM160B2Q86V87 743 aa24.41■■□□□ 1.5
COL6A1-203ENST00000466285 FBXO16Q8IX29 292 aaPredicted RBP24.41■■□□□ 1.5
COL6A1-203ENST00000466285 TRERF1Q96PN7 1200 aa24.41■■□□□ 1.5
COL6A1-203ENST00000466285 CHD9Q3L8U1 2897 aa24.4■■□□□ 1.5
COL6A1-203ENST00000466285 NMIQ13287 307 aaPredicted RBP24.4■■□□□ 1.5
COL6A1-203ENST00000466285 RCSD1Q6JBY9 416 aa24.4■■□□□ 1.5
COL6A1-203ENST00000466285 C16orf59Q7L2K0 433 aa24.4■■□□□ 1.5
COL6A1-203ENST00000466285 EEPD1Q7L9B9 569 aa24.4■■□□□ 1.5
COL6A1-203ENST00000466285 TOX2Q96NM4 488 aa24.4■■□□□ 1.5
COL6A1-203ENST00000466285 FRMPD2Q68DX3 1309 aaPredicted RBP24.39■■□□□ 1.5
COL6A1-203ENST00000466285 ORC4O43929 436 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 FGRP09769 529 aa24.39■■□□□ 1.49
COL6A1-203ENST00000466285 HAND2P61296 217 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms