RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PDHBP11177 359 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 FCER1AP12319 257 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 CCND3P30281 292 aaPredicted RBP11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 CYP2C19P33261 490 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 KCTD2Q14681 263 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 ENAHQ8N8S7 591 aaPredicted RBP11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 NCOA7Q8NI08 942 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 USP6NLQ92738 828 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 SHISA4Q96DD7 197 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 CPVLQ9H3G5 476 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 ADAMTS5Q9UNA0 930 aa11.42□□□□□ -0.58
RTFDC1-205ENST00000466260 ERICH2A1L162 156 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 SLC27A2O14975 620 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 COBLO75128 1261 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 ALAS1P13196 640 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 CNGA1P29973 690 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 NOVP48745 357 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 RGS19P49795 217 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 CACNB2Q08289 660 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 TTC14Q96N46 770 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 ALPK3Q96L96 1907 aa11.41□□□□□ -0.58
RTFDC1-205ENST00000466260 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 HAX1O00165 279 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 STRNO43815 780 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 TFRCP02786 760 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 GJB1P08034 283 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 XRCC5P13010 732 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 COPB2P35606 906 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 ZNF543Q08ER8 600 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 WTAPQ15007 396 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 CREB3L3Q68CJ9 461 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 UBA5Q9GZZ9 404 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 RNF146Q9NTX7 359 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
RTFDC1-205ENST00000466260 ZNF536O15090 1300 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 LRRC37A2A6NM11 1700 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 SGPL1O95470 568 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 GJA8P48165 433 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 BAZ2BQ9UIF8 2168 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-205ENST00000466260 HOXC6P09630 235 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 FDX1P10109 184 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 ANTXR2P58335 489 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 COL9A3Q14050 684 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 SART3Q15020 963 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 SEC23AQ15436 765 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 USH1GQ495M9 461 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 GPATCH4Q5T3I0 446 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 NSMFQ6X4W1 530 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 RAB11FIP4Q86YS3 637 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 MB21D2Q8IYB1 491 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 MYL10Q9BUA6 226 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 ACAD9Q9H845 621 aa11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 PAK6Q9NQU5 681 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-205ENST00000466260 ATP2A1O14983 1001 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 PRC1O43663 620 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 PLA2G6O60733 806 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 FARP2O94887 1054 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 NT5C2P49902 561 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 OAZ1P54368 228 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 NECTIN1Q15223 517 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 ZNF792Q3KQV3 632 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 ASPRV1Q53RT3 343 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 MAP3K21Q5TCX8 1036 aa11.37□□□□□ -0.59
RTFDC1-205ENST00000466260 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms