RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 PAWRQ96IZ0 340 aaKnown RBP11.94□□□□□ -0.5
CD40-204ENST00000466205 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 SLC5A4Q9NY91 659 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 CCPG1Q9ULG6 757 aa11.94□□□□□ -0.5
CD40-204ENST00000466205 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 SLC27A2O14975 620 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 DHX16O60231 1041 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 CDC45O75419 566 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 CYBAP13498 195 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 COPB2P35606 906 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 OAZ1P54368 228 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 COL9A3Q14050 684 aaPredicted RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 DPF3Q92784 378 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 ACAD9Q9H845 621 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 VAT1LQ9HCJ6 419 aa11.93□□□□□ -0.5
CD40-204ENST00000466205 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 DDX49Q9Y6V7 483 aaKnown RBP11.93□□□□□ -0.5
CD40-204ENST00000466205 PLA2G6O60733 806 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 SEC23AQ15436 765 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 USH1GQ495M9 461 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 LHX8Q68G74 356 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 LENG1Q96BZ8 264 aaPredicted RBP11.92□□□□□ -0.5
CD40-204ENST00000466205 A1CFQ9NQ94 594 aaKnown RBP11.92□□□□□ -0.5
CD40-204ENST00000466205 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
CD40-204ENST00000466205 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
CD40-204ENST00000466205 ERICH2A1L162 156 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 ICAM1P05362 532 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
CD40-204ENST00000466205 FDX1P10109 184 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
CD40-204ENST00000466205 ANTXR2P58335 489 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 WTAPQ15007 396 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
CD40-204ENST00000466205 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 UBE2Q1Q7Z7E8 422 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 RAB11FIP4Q86YS3 637 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 MB21D2Q8IYB1 491 aaPredicted RBP11.91□□□□□ -0.5
CD40-204ENST00000466205 ANKS1AQ92625 1134 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 TINF2Q9BSI4 451 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 MYL10Q9BUA6 226 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 FBXO40Q9UH90 709 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 ZHX1Q9UKY1 873 aaPredicted RBP11.91□□□□□ -0.5
CD40-204ENST00000466205 OGDHLQ9ULD0 1010 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 PLXNA1Q9UIW2 1896 aa11.91□□□□□ -0.5
CD40-204ENST00000466205 DNAJC25-GNG10A0A024R161 153 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 NFIBO00712 420 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 PRC1O43663 620 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 IGHA2P01877 340 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 NECTIN1Q15223 517 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
CD40-204ENST00000466205 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
CD40-204ENST00000466205 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 FGD4Q96M96 766 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 C11orf49Q9H6J7 331 aa11.9□□□□□ -0.5
CD40-204ENST00000466205 KIAA0100Q14667 2235 aaKnown RBP11.9□□□□□ -0.51
CD40-204ENST00000466205 ZNFX1Q9P2E3 1918 aaKnown RBP11.9□□□□□ -0.51
CD40-204ENST00000466205 MKI67P46013 3256 aaKnown RBP11.89□□□□□ -0.51
CD40-204ENST00000466205 FRMPD3Q5JV73 1810 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 SOWAHBA6NEL2 793 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 RXRAP19793 462 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 CALML3P27482 149 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 NT5C2P49902 561 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 BAATQ14032 418 aaPredicted RBP11.89□□□□□ -0.51
CD40-204ENST00000466205 SART3Q15020 963 aaKnown RBP11.89□□□□□ -0.51
CD40-204ENST00000466205 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 SLC30A10Q6XR72 485 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 HOMER1Q86YM7 354 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 CCDC144CPQ8IYA2 1237 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 HTATIP2Q9BUP3 242 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
CD40-204ENST00000466205 CYP39A1Q9NYL5 469 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 CNPY2Q9Y2B0 182 aa11.89□□□□□ -0.51
CD40-204ENST00000466205 DIS3Q9Y2L1 958 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms