RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 VPS53Q5VIR6 699 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 KLHDC9Q8NEP7 349 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 FERMT2Q96AC1 680 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 TACC3Q9Y6A5 838 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 ZNF536O15090 1300 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 SYNRGQ9UMZ2 1314 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 MOXD2PA6NHM9 499 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 DUSP11O75319 330 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 CST5P28325 142 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 MCMDC2Q4G0Z9 681 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 FAM109BQ6ICB4 259 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 CCSAPQ6IQ19 270 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 DEFB123Q8N688 67 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 ABHD16BQ9H3Z7 469 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 STX8Q9UNK0 236 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 MCM3APO60318 1980 aa14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 LAMA2P24043 3122 aaKnown RBP14.76□□□□□ -0.05
SOX2-OT-203ENST00000466034 TRIM43BA6NCK2 446 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 MCCP23508 829 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 TLE2Q04725 743 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 SMC5Q8IY18 1101 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 FAM133AQ8N9E0 248 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 TRIM43Q96BQ3 446 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 TOX2Q96NM4 488 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 KATNBL1Q9H079 304 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 UPF3AQ9H1J1 476 aaKnown RBP14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 INCENPQ9NQS7 918 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 TCP11L1Q9NUJ3 509 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 MTMR10Q9NXD2 777 aa14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 ZHX1Q9UKY1 873 aaPredicted RBP14.75□□□□□ -0.05
SOX2-OT-203ENST00000466034 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 FGAP02671 866 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 CLTBP09497 229 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 ACLYP53396 1101 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 NKX3-2P78367 333 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 Q7L0L9 218 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 ARMCX2Q7L311 632 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 ANKRD33Q7Z3H0 272 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 SH3RF1Q7Z6J0 888 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 FAM227BQ96M60 508 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 A1CFQ9NQ94 594 aaKnown RBP14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 RNF146Q9NTX7 359 aa14.74□□□□□ -0.05
SOX2-OT-203ENST00000466034 KIAA0355O15063 1070 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 NMT2O60551 498 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 HSPD1P10809 573 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 PCP11498 1178 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 GJA9P57773 515 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 IKQ13123 557 aaPredicted RBP14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 BTNL9Q6UXG8 535 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 BADQ92934 168 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 TRERF1Q96PN7 1200 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 HOMER2Q9NSB8 354 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 PRR12Q9ULL5 1215 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 STXBP5LQ9Y2K9 1186 aa14.73□□□□□ -0.05
SOX2-OT-203ENST00000466034 ELP1O95163 1332 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 ASB14A6NK59 587 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 ADCY6O43306 1168 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 KCNA10Q16322 511 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 CCDC144BQ3MJ40 725 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 ZNF589Q86UQ0 364 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 CCDC144CPQ8IYA2 1237 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 LNPKQ9C0E8 428 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 OSBPL3Q9H4L5 887 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 LRRC37A2A6NM11 1700 aa14.72□□□□□ -0.05
SOX2-OT-203ENST00000466034 MYADML2A6NDP7 307 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 SOWAHBA6NEL2 793 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 ICAM1P05362 532 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 ALAS1P13196 640 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 ITGB8P26012 769 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 NT5C2P49902 561 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 SHHQ15465 462 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 C9orf50Q5SZB4 431 aa14.71□□□□□ -0.05
SOX2-OT-203ENST00000466034 RASGRP2Q7LDG7 609 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms