RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 TRIM13O60858 407 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 ZNF16P17020 682 aaPredicted RBP4.98□□□□□ -1.61
SNX4-202ENST00000465505 CDR1P51861 262 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 LAPTM5Q13571 262 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 CRTC3Q6UUV7 619 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 LDHDQ86WU2 507 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 TMEM151BQ8IW70 566 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 TMEFF1Q8IYR6 380 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 MZB1Q8WU39 189 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 JMJD8Q96S16 334 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 BACH2Q9BYV9 841 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 ZCCHC4Q9H5U6 513 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 TAF6LQ9Y6J9 622 aa4.98□□□□□ -1.61
SNX4-202ENST00000465505 FAM86C2PA6NEL3 165 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 GSNP06396 782 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 IMPDH2P12268 514 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 ZNF76P36508 570 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 ARL4AP40617 200 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 PMS1P54277 932 aaKnown RBP4.97□□□□□ -1.61
SNX4-202ENST00000465505 CYP4F8P98187 520 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 TRIM26Q12899 539 aaPredicted RBP4.97□□□□□ -1.61
SNX4-202ENST00000465505 CBX2Q14781 532 aaPredicted RBP4.97□□□□□ -1.61
SNX4-202ENST00000465505 OLFML2BQ68BL8 750 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 CCDC144CPQ8IYA2 1237 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 TAB3Q8N5C8 712 aaPredicted RBP4.97□□□□□ -1.61
SNX4-202ENST00000465505 RELTQ969Z4 430 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 SLC12A9Q9BXP2 914 aa4.97□□□□□ -1.61
SNX4-202ENST00000465505 A0A0G2JLL6 359 aaPredicted RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 LOC105371045A0A1W2PR82 267 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 BUD31P41223 144 aaPredicted RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 AFF3P51826 1226 aaKnown RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 FANCCQ00597 558 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 MVKQ03426 396 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 RAB3GAP1Q15042 981 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 AXDND1Q5T1B0 1012 aaPredicted RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 USP48Q86UV5 1035 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 PPFIBP1Q86W92 1011 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 FAM129CQ86XR2 697 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 IGDCC3Q8IVU1 814 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 RBBP8NLQ8NC74 664 aaPredicted RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 NUP43Q8NFH3 380 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 TM9SF2Q99805 663 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 DSCC1Q9BVC3 393 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 SRRTQ9BXP5 876 aaKnown RBP4.96□□□□□ -1.62
SNX4-202ENST00000465505 TNFRSF12AQ9NP84 129 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 IMPACTQ9P2X3 320 aa4.96□□□□□ -1.62
SNX4-202ENST00000465505 H0Y8X5 98 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 GSTM1P09488 218 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 CD247P20963 164 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 ZNF445P59923 1031 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 TMEM62Q0P6H9 643 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 ZYXQ15942 572 aaKnown RBP4.95□□□□□ -1.62
SNX4-202ENST00000465505 ZNF394Q53GI3 561 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 TDRD10Q5VZ19 366 aaKnown RBP4.95□□□□□ -1.62
SNX4-202ENST00000465505 HLA-DQA1Q5Y7H0 255 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 DCAF15Q66K64 600 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 FAM9AQ8IZU1 332 aaPredicted RBP4.95□□□□□ -1.62
SNX4-202ENST00000465505 UBE2Q2Q8WVN8 375 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 KRTAP17-1Q9BYP8 105 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 XYLT2Q9H1B5 865 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 GP6Q9HCN6 339 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 METTL5Q9NRN9 209 aaKnown RBP4.95□□□□□ -1.62
SNX4-202ENST00000465505 CDK11AQ9UQ88 783 aaPredicted RBP4.95□□□□□ -1.62
SNX4-202ENST00000465505 PCDHA5Q9Y5H7 936 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 IRS2Q9Y4H2 1338 aa4.95□□□□□ -1.62
SNX4-202ENST00000465505 NUDT19A8MXV4 375 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 FOXD2O60548 495 aaPredicted RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 MSL3P1P0C860 447 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 RACK1P63244 317 aaKnown RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 VMACQ2NL98 169 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 NOL9Q5SY16 702 aaKnown RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 CWF19L1Q69YN2 538 aaKnown RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 CNKSR3Q6P9H4 555 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 RPTNQ6XPR3 784 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 UNC5AQ6ZN44 842 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 RUFY4Q6ZNE9 571 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 TMC6Q7Z403 805 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 SMARCC1Q92922 1105 aaPredicted RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 BRF1Q92994 677 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 FCRL3Q96P31 734 aaPredicted RBP4.94□□□□□ -1.62
SNX4-202ENST00000465505 FERD3LQ96RJ6 166 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 PPT2Q9UMR5 302 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 ZNF451Q9Y4E5 1061 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 PCDHGB7Q9Y5F8 929 aa4.94□□□□□ -1.62
SNX4-202ENST00000465505 OTOL1A6NHN0 477 aaPredicted RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 FGF10O15520 208 aaPredicted RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 TP53P04637 393 aaPredicted RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 GUCY2CP25092 1073 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 NOP2P46087 812 aaKnown RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 MAPKAPK2P49137 400 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 NCKAP1LP55160 1127 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 NR1I3Q14994 352 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 DDX41Q9UJV9 622 aaKnown RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 ZNF214Q9UL59 606 aaPredicted RBP4.93□□□□□ -1.62
SNX4-202ENST00000465505 FHOD1Q9Y613 1164 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 LTBP3Q9NS15 1303 aa4.93□□□□□ -1.62
SNX4-202ENST00000465505 A0A087WZG4 1122 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms