RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.49
HDAC6-214ENST00000465269 MAMDC4Q6UXC1 1216 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 ANKS1AQ92625 1134 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-214ENST00000465269 SPC25Q9HBM1 224 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 GPR108Q9NPR9 543 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 SCN5AQ14524 2016 aa18.13■□□□□ 0.49
HDAC6-214ENST00000465269 NHLH1Q02575 133 aa18.13■□□□□ 0.49
HDAC6-214ENST00000465269 TAP1Q03518 808 aa18.13■□□□□ 0.49
HDAC6-214ENST00000465269 GRB10Q13322 594 aa18.13■□□□□ 0.49
HDAC6-214ENST00000465269 ITGA7Q13683 1181 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 TMEM63BQ5T3F8 832 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
HDAC6-214ENST00000465269 ARMCX2Q7L311 632 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 LCORLQ8N3X6 602 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
HDAC6-214ENST00000465269 PPP1R13LQ8WUF5 828 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 EAF2Q96CJ1 260 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-214ENST00000465269 AGBL1Q96MI9 1066 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
HDAC6-214ENST00000465269 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-214ENST00000465269 MYH8P13535 1937 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 PRKAB2O43741 272 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 LPXNO60711 386 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 BCAR3O75815 825 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 CYP2C9P11712 490 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 SLFNL1Q499Z3 407 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 CERS3Q8IU89 383 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 CRNKL1Q9BZJ0 848 aaKnown RBP18.11■□□□□ 0.49
HDAC6-214ENST00000465269 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
HDAC6-214ENST00000465269 COL4A4P53420 1690 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-214ENST00000465269 PRR33A8MZF0 331 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
HDAC6-214ENST00000465269 CNTN2Q02246 1040 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 CCDC144CPQ8IYA2 1237 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 RPUSD2Q8IZ73 545 aaKnown RBP18.1■□□□□ 0.49
HDAC6-214ENST00000465269 FBXL18Q96ME1 805 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 TEX13BQ9BXU2 312 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 ABHD16BQ9H3Z7 469 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 C5orf42Q9H799 3197 aa18.1■□□□□ 0.49
HDAC6-214ENST00000465269 CACNA1AO00555 2505 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 PDE6AP16499 860 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 POLA2Q14181 598 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 TMCO2Q7Z6W1 182 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-214ENST00000465269 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 ARMT1Q9H993 441 aa18.09■□□□□ 0.49
HDAC6-214ENST00000465269 RAVER2Q9HCJ3 691 aaKnown RBP18.09■□□□□ 0.49
HDAC6-214ENST00000465269 TRMT13Q9NUP7 481 aaKnown RBP18.09■□□□□ 0.49
HDAC6-214ENST00000465269 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.49
HDAC6-214ENST00000465269 LCHNA4D1U4 455 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 COPB2P35606 906 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 CDK8P49336 464 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 TNFAIP2Q03169 654 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 FSCN1Q16658 493 aaKnown RBP18.08■□□□□ 0.48
HDAC6-214ENST00000465269 GJD3Q8N144 294 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 PHOX2BQ99453 314 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 SLF1Q9BQI6 1058 aa18.08■□□□□ 0.48
HDAC6-214ENST00000465269 ZNF532Q9HCE3 1301 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 DYNC1LI2O43237 492 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-214ENST00000465269 ANP32CO43423 234 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 IL9P15248 144 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 SSTR3P32745 418 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-214ENST00000465269 SLC9C2Q5TAH2 1124 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 ZNF467Q7Z7K2 595 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-214ENST00000465269 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 PDGFCQ9NRA1 345 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 SWAP70Q9UH65 585 aa18.07■□□□□ 0.48
HDAC6-214ENST00000465269 IGSF3O75054 1194 aa18.06■□□□□ 0.48
HDAC6-214ENST00000465269 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
HDAC6-214ENST00000465269 FAM178BQ8IXR5 827 aa18.06■□□□□ 0.48
HDAC6-214ENST00000465269 TET1Q8NFU7 2136 aa18.06■□□□□ 0.48
HDAC6-214ENST00000465269 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC6-214ENST00000465269 ALDH8A1Q9H2A2 487 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-214ENST00000465269 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
HDAC6-214ENST00000465269 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
HDAC6-214ENST00000465269 GNEQ9Y223 722 aaKnown RBP18.06■□□□□ 0.48
HDAC6-214ENST00000465269 ZNF318Q5VUA4 2279 aa18.05■□□□□ 0.48
HDAC6-214ENST00000465269 CHGBP05060 677 aa18.05■□□□□ 0.48
HDAC6-214ENST00000465269 SMPD1P17405 629 aa18.05■□□□□ 0.48
HDAC6-214ENST00000465269 NKX3-2P78367 333 aa18.05■□□□□ 0.48
HDAC6-214ENST00000465269 HERC6Q8IVU3 1022 aa18.05■□□□□ 0.48
HDAC6-214ENST00000465269 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
HDAC6-214ENST00000465269 UBE2ZQ9H832 354 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-214ENST00000465269 ZDBF2Q9HCK1 2354 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 SPTBN4Q9H254 2564 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 TCRBV5S4A2TA0A5A2 114 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 TRIM27P14373 513 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 KCNA5P22460 613 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 EEPD1Q7L9B9 569 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 STK11IPQ8N1F8 1099 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-214ENST00000465269 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
HDAC6-214ENST00000465269 KIFC2Q96AC6 838 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms