RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 NUP133Q8WUM0 1156 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL11A1-207ENST00000465209 DCTPP1Q9H773 170 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 MKNK2Q9HBH9 465 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 ASTN1O14525 1302 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 TTLL1O95922 423 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 ASGR1P07306 291 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 FOSL2P15408 326 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
COL11A1-207ENST00000465209 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 FAM126BQ8IXS8 530 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 PI4K2BQ8TCG2 481 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 ABHD16BQ9H3Z7 469 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
COL11A1-207ENST00000465209 TRANK1O15050 2925 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-207ENST00000465209 DCDC2CA8MYV0 355 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
COL11A1-207ENST00000465209 ZBED4O75132 1171 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 CD4P01730 458 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-207ENST00000465209 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-207ENST00000465209 GNAT2P19087 354 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 SLC43A3Q8NBI5 491 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
COL11A1-207ENST00000465209 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
COL11A1-207ENST00000465209 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 ARVCFO00192 962 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 BMP3P12645 472 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 TDO2P48775 406 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 RASGRP2Q7LDG7 609 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 GMCL1Q96IK5 515 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
COL11A1-207ENST00000465209 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 GNEQ9Y223 722 aaKnown RBP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL11A1-207ENST00000465209 PLA2G6O60733 806 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 CSF2RAP15509 400 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 PTGS1P23219 599 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 PBX2P40425 430 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 NOVP48745 357 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 STAT2P52630 851 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 ZNF444Q8N0Y2 327 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-207ENST00000465209 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 PBX4Q9BYU1 374 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 ACAD9Q9H845 621 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
COL11A1-207ENST00000465209 GRIN2DO15399 1336 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
COL11A1-207ENST00000465209 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 FDX1P10109 184 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 PPARAQ07869 468 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 PPIGQ13427 754 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL11A1-207ENST00000465209 ZMYM1Q5SVZ6 1142 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
COL11A1-207ENST00000465209 TIFAQ96CG3 184 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 VWCEQ96DN2 955 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 RNF146Q9NTX7 359 aa13.02□□□□□ -0.33
COL11A1-207ENST00000465209 SCN10AQ9Y5Y9 1956 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 BEX3Q00994 111 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 TFAP4Q01664 338 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 TMEM63BQ5T3F8 832 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 MORC4Q8TE76 937 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 SPC25Q9HBM1 224 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 TANC1Q9C0D5 1861 aa13.01□□□□□ -0.33
COL11A1-207ENST00000465209 SCN5AQ14524 2016 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms