RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.28□□□□□ -1.24
SSBP1-204ENST00000465167 ECM29Q5VYK3 1845 aa7.28□□□□□ -1.24
SSBP1-204ENST00000465167 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
SSBP1-204ENST00000465167 FAM155AB1AL88 458 aaPredicted RBP7.27□□□□□ -1.25
SSBP1-204ENST00000465167 CYP2E1P05181 493 aaPredicted RBP7.27□□□□□ -1.25
SSBP1-204ENST00000465167 NFKB1P19838 968 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 FGFR3P22607 806 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 IRS1P35568 1242 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 CHRNDQ07001 517 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 DLGAP5Q15398 846 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 DACT2Q5SW24 774 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 FOXR1Q6PIV2 292 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 PI16Q6UXB8 463 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 SV2AQ7L0J3 742 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 G2E3Q7L622 706 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 KIAA0825Q8IV33 1275 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 VWA5B2Q8N398 1253 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 TRERF1Q96PN7 1200 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 NPHS2Q9NP85 383 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
SSBP1-204ENST00000465167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.27□□□□□ -1.25
SSBP1-204ENST00000465167 ASTN2O75129 1339 aaPredicted RBP7.27□□□□□ -1.25
SSBP1-204ENST00000465167 A0A1B0GUL6 1792 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 CDC14CA4D256 554 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 GPR25O00155 361 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 WNT10BO00744 389 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 PLIN1O60240 522 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 SASH1O94885 1247 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 MAP3K6O95382 1288 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 TCF3P15923 654 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 RBM5P52756 815 aaKnown RBP eCLIP7.26□□□□□ -1.25
SSBP1-204ENST00000465167 CTBSQ01459 385 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 EXOSC9Q06265 439 aaKnown RBP7.26□□□□□ -1.25
SSBP1-204ENST00000465167 PKN2Q16513 984 aaKnown RBP7.26□□□□□ -1.25
SSBP1-204ENST00000465167 SLC4A10Q6U841 1118 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 DLK2Q6UY11 383 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 LDHAL6AQ6ZMR3 332 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 VPS37DQ86XT2 251 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 BHMTQ93088 406 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 GMLQ99445 158 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 OSBPL7Q9BZF2 842 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 RNF186Q9NXI6 227 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 TLR7Q9NYK1 1049 aaKnown RBP7.26□□□□□ -1.25
SSBP1-204ENST00000465167 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 PPP2R3BQ9Y5P8 575 aa7.26□□□□□ -1.25
SSBP1-204ENST00000465167 UBE2Q2LH0YL09 131 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 GRM8O00222 908 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 GIPC1O14908 333 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 VAMP4O75379 141 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
SSBP1-204ENST00000465167 CSF1RP07333 972 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 TNFAIP1Q13829 316 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 PRKG1Q13976 671 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 NBPF9Q3BBW0 867 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 CCDC184Q52MB2 194 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 RAB44Q7Z6P3 723 aaPredicted RBP7.25□□□□□ -1.25
SSBP1-204ENST00000465167 CTU1Q7Z7A3 348 aaKnown RBP7.25□□□□□ -1.25
SSBP1-204ENST00000465167 FAM9BQ8IZU0 186 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 MXD3Q9BW11 206 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 SRCIN1Q9C0H9 1055 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 VEZTQ9HBM0 779 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 CD209Q9NNX6 404 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 KANSL3Q9P2N6 904 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 SALL4Q9UJQ4 1053 aa7.25□□□□□ -1.25
SSBP1-204ENST00000465167 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
SSBP1-204ENST00000465167 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 PHF20L1A8MW92 1017 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 F6X3S4 739 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 F8W031 263 aaPredicted RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 TAF5LO75529 589 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 ALDH1L1O75891 902 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 PSAPP07602 524 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 HOXD8P13378 290 aaPredicted RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 EIF4BP23588 611 aaKnown RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 SOX18P35713 384 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 IREB2P48200 963 aaKnown RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 FKBP1AP62942 108 aaKnown RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 SUPT20HL1Q3ZLR7 823 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 PRAMEF18Q5VWM3 479 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 OTUD7BQ6GQQ9 843 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 TMEM87AQ8NBN3 555 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 C12orf49Q9H741 205 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 SCAF8Q9UPN6 1271 aaKnown RBP7.24□□□□□ -1.25
SSBP1-204ENST00000465167 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
SSBP1-204ENST00000465167 MANSC4A6NHS7 340 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-204ENST00000465167 SCAMP3O14828 347 aaKnown RBP7.23□□□□□ -1.25
SSBP1-204ENST00000465167 KIF4AO95239 1232 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 TBC1D8O95759 1140 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 CTSHP09668 335 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 EDN3P14138 238 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 KLRK1P26718 216 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 TNNI2P48788 182 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 CASP7P55210 303 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 INHBEP58166 350 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 CFAP100Q494V2 611 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 CAVIN4Q5BKX8 364 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 BEND3Q5T5X7 828 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 KIAA0319Q5VV43 1072 aa7.23□□□□□ -1.25
SSBP1-204ENST00000465167 C15orf52Q6ZUT6 534 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms