RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 KCNQ1P51787 676 aa19.79■□□□□ 0.76
COPS6-205ENST00000465027 GJA9P57773 515 aa19.79■□□□□ 0.76
COPS6-205ENST00000465027 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
COPS6-205ENST00000465027 PCSK9Q8NBP7 692 aaKnown RBP19.79■□□□□ 0.76
COPS6-205ENST00000465027 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
COPS6-205ENST00000465027 BDP1A6H8Y1 2624 aa19.79■□□□□ 0.76
COPS6-205ENST00000465027 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.78■□□□□ 0.76
COPS6-205ENST00000465027 TLR3O15455 904 aaKnown RBP19.78■□□□□ 0.76
COPS6-205ENST00000465027 FGBP02675 491 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 BMP1P13497 986 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 ADD2P35612 726 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 CCL23P55773 120 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 ARMCX2Q7L311 632 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 RAVER2Q9HCJ3 691 aaKnown RBP19.78■□□□□ 0.76
COPS6-205ENST00000465027 ATP8A2Q9NTI2 1148 aa19.78■□□□□ 0.76
COPS6-205ENST00000465027 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
COPS6-205ENST00000465027 ASTN1O14525 1302 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 RFXAPO00287 272 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 CXCL17Q6UXB2 119 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 ERC1Q8IUD2 1116 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 FTSJ3Q8IY81 847 aaKnown RBP19.77■□□□□ 0.76
COPS6-205ENST00000465027 KATNBL1Q9H079 304 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 SPC25Q9HBM1 224 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 XIRP2A4UGR9 3374 aa19.77■□□□□ 0.76
COPS6-205ENST00000465027 NDUFB10O96000 172 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 CNTN2Q02246 1040 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 CTR9Q6PD62 1173 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 ABHD16BQ9H3Z7 469 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 HIPK3Q9H422 1215 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 GRIN2DO15399 1336 aa19.76■□□□□ 0.75
COPS6-205ENST00000465027 NEFLP07196 543 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 MS4A1P11836 297 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 PPP2R2DQ66LE6 453 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 ZNF467Q7Z7K2 595 aaPredicted RBP19.75■□□□□ 0.75
COPS6-205ENST00000465027 CCDC144CPQ8IYA2 1237 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 ANKRD35Q8N283 1001 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 VWCEQ96DN2 955 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 TRPV6Q9H1D0 765 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 WNT8AQ9H1J5 351 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 PAG1Q9NWQ8 432 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
COPS6-205ENST00000465027 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
COPS6-205ENST00000465027 F5H6K3 240 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 KLRC3Q07444 240 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 SKIV2LQ15477 1246 aaKnown RBP19.74■□□□□ 0.75
COPS6-205ENST00000465027 NOL8Q76FK4 1167 aaKnown RBP19.74■□□□□ 0.75
COPS6-205ENST00000465027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.74■□□□□ 0.75
COPS6-205ENST00000465027 SCLYQ96I15 445 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 EPHX3Q9H6B9 360 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 CERS4Q9HA82 394 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 HOMER2Q9NSB8 354 aa19.74■□□□□ 0.75
COPS6-205ENST00000465027 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
COPS6-205ENST00000465027 PSMC6P62333 389 aa19.73■□□□□ 0.75
COPS6-205ENST00000465027 TMEM63BQ5T3F8 832 aa19.73■□□□□ 0.75
COPS6-205ENST00000465027 KRT40Q6A162 431 aa19.73■□□□□ 0.75
COPS6-205ENST00000465027 AMOTL1Q8IY63 956 aa19.73■□□□□ 0.75
COPS6-205ENST00000465027 PRPF38AQ8NAV1 312 aaKnown RBP19.73■□□□□ 0.75
COPS6-205ENST00000465027 SLC43A3Q8NBI5 491 aa19.73■□□□□ 0.75
COPS6-205ENST00000465027 NOC4LQ9BVI4 516 aaKnown RBP19.73■□□□□ 0.75
COPS6-205ENST00000465027 MTIF3Q9H2K0 278 aaKnown RBP19.73■□□□□ 0.75
COPS6-205ENST00000465027 ZBBXA8MT70 800 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 B4GALT4O60513 344 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 ZBED4O75132 1171 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 IFIT2P09913 472 aaKnown RBP19.72■□□□□ 0.75
COPS6-205ENST00000465027 RASA1P20936 1047 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 ITGA7Q13683 1181 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
COPS6-205ENST00000465027 PUS7LQ9H0K6 701 aaKnown RBP19.72■□□□□ 0.75
COPS6-205ENST00000465027 TSPYL2Q9H2G4 693 aaPredicted RBP19.72■□□□□ 0.75
COPS6-205ENST00000465027 CTDP1Q9Y5B0 961 aaPredicted RBP19.72■□□□□ 0.75
COPS6-205ENST00000465027 SLC4A7Q9Y6M7 1214 aa19.72■□□□□ 0.75
COPS6-205ENST00000465027 PRRC2BQ5JSZ5 2229 aaKnown RBP19.71■□□□□ 0.75
COPS6-205ENST00000465027 EPOPA6NHQ4 379 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 ATP2A1O14983 1001 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 TNFAIP2Q03169 654 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 CHMP4CQ96CF2 233 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 LRFN3Q9BTN0 628 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 C1QTNF1Q9BXJ1 281 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 SLC38A10Q9HBR0 1119 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 CLIP2Q9UDT6 1046 aa19.71■□□□□ 0.75
COPS6-205ENST00000465027 NKX3-2P78367 333 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 TTLL4Q14679 1199 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 TLK2Q86UE8 772 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 PANK1Q8TE04 598 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 PDGFCQ9NRA1 345 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 NYAP2Q9P242 653 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 GNEQ9Y223 722 aaKnown RBP19.7■□□□□ 0.74
COPS6-205ENST00000465027 PCDHA11Q9Y5I1 949 aa19.7■□□□□ 0.74
COPS6-205ENST00000465027 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
COPS6-205ENST00000465027 DYNC1LI2O43237 492 aaPredicted RBP19.69■□□□□ 0.74
COPS6-205ENST00000465027 ARHGEF15O94989 841 aa19.69■□□□□ 0.74
COPS6-205ENST00000465027 ATP2A2P16615 1042 aaKnown RBP19.69■□□□□ 0.74
COPS6-205ENST00000465027 SMPD1P17405 629 aa19.69■□□□□ 0.74
COPS6-205ENST00000465027 FSCN1Q16658 493 aaKnown RBP19.69■□□□□ 0.74
COPS6-205ENST00000465027 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
COPS6-205ENST00000465027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.69■□□□□ 0.74
COPS6-205ENST00000465027 LRRC47Q8N1G4 583 aaKnown RBP19.69■□□□□ 0.74
COPS6-205ENST00000465027 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms