RNA–Protein interactions for RNA: ENST00000464969.6

NOLC1-204, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 2

Gene NOLC1, Length 2,288 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-204ENST00000464969 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
NOLC1-204ENST00000464969 PARK7Q99497 189 aaKnown RBP13.31□□□□□ -0.28
NOLC1-204ENST00000464969 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
NOLC1-204ENST00000464969 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
NOLC1-204ENST00000464969 SLC45A1Q9Y2W3 748 aa13.31□□□□□ -0.28
NOLC1-204ENST00000464969 CTDP1Q9Y5B0 961 aaPredicted RBP13.31□□□□□ -0.28
NOLC1-204ENST00000464969 ZBED4O75132 1171 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 FDPSP14324 419 aaKnown RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 ANP32AP39687 249 aaKnown RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 COA7Q96BR5 231 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 RANBP17Q9H2T7 1088 aaKnown RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 ZNF536O15090 1300 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
NOLC1-204ENST00000464969 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 RNF186Q9NXI6 227 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 ADAMTS5Q9UNA0 930 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 RIPK3Q9Y572 518 aa13.3□□□□□ -0.28
NOLC1-204ENST00000464969 ZBTB5O15062 677 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 CUL4AQ13619 759 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 PKN1Q16512 942 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 ZNF214Q9UL59 606 aaPredicted RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 COL11A1P12107 1806 aaPredicted RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 CA12O43570 354 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
NOLC1-204ENST00000464969 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
NOLC1-204ENST00000464969 PNMA6FA0A0J9YX94 578 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 TLR2O60603 784 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 CDKL5O76039 1030 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 HSP90AA1P07900 732 aaKnown RBP13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ALAS1P13196 640 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 WWC2Q6AWC2 1192 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SMCHD1A6NHR9 2005 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ADGRA2Q96PE1 1338 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 GJB2P29033 226 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 STAT3P40763 770 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ERVK-9P63128 1117 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ERVK-24P63145 666 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 BECN1Q14457 450 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SPATC1LQ9H0A9 340 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
NOLC1-204ENST00000464969 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 THSD7BQ9C0I4 1608 aa13.28□□□□□ -0.28
NOLC1-204ENST00000464969 ALDH1A1P00352 501 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 ICAM1P05362 532 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 SCG2P13521 617 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 PFKFB3Q16875 520 aaPredicted RBP13.27□□□□□ -0.28
NOLC1-204ENST00000464969 WDR78Q5VTH9 848 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.28
NOLC1-204ENST00000464969 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.28
NOLC1-204ENST00000464969 MOV10L1Q9BXT6 1211 aaKnown RBP13.27□□□□□ -0.28
NOLC1-204ENST00000464969 PORCNQ9H237 461 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 PCDHA1Q9Y5I3 950 aa13.27□□□□□ -0.28
NOLC1-204ENST00000464969 DEXIO95424 95 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 GUCY1B3Q02153 619 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 C17orf99Q6UX52 265 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 GPRC5AQ8NFJ5 357 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
NOLC1-204ENST00000464969 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.27□□□□□ -0.29
NOLC1-204ENST00000464969 A0A0G2JMZ2 1700 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 BCRP11274 1271 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
NOLC1-204ENST00000464969 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 ALG1Q9BT22 464 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 MYH6P13533 1939 aa13.26□□□□□ -0.29
NOLC1-204ENST00000464969 STXBP3O00186 592 aa13.25□□□□□ -0.29
NOLC1-204ENST00000464969 NFIBO00712 420 aa13.25□□□□□ -0.29
NOLC1-204ENST00000464969 ERCC3P19447 782 aa13.25□□□□□ -0.29
NOLC1-204ENST00000464969 TBC1D5Q92609 795 aa13.25□□□□□ -0.29
NOLC1-204ENST00000464969 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms