RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TBC1D8BQ0IIM8 1120 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 AENQ8WTP8 325 aaKnown RBP14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 HPS3Q969F9 1004 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 TUBGCP2Q9BSJ2 902 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 TNS3Q68CZ2 1445 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 NCK2O43639 380 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 MOCS3O95396 460 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 CCDC96Q2M329 555 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 NFRKBQ6P4R8 1299 aa14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
CLCNKA-204ENST00000464764 EBAG9O00559 213 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 ZPR1O75312 459 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 ERLIN2O94905 339 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 ATP1A2P50993 1020 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 CKAP4Q07065 602 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 PRDM11Q9NQV5 511 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 GRIN2DO15399 1336 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 FAM205AQ6ZU69 1335 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 MCM3P25205 808 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 PDCLQ13371 301 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 TMTC3Q6ZXV5 915 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 TMEM60Q9H2L4 133 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 PNPLA7Q6ZV29 1317 aa14.07□□□□□ -0.16
CLCNKA-204ENST00000464764 BMP15O95972 392 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 ATF3P18847 181 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 GNAT2P19087 354 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 DNA2P51530 1060 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 MEA1Q16626 185 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 TTMPQ5BVD1 217 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 TYW1BQ6NUM6 668 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 CSGALNACT2Q8N6G5 542 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 C4orf32Q8N8J7 132 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 PDS5AQ29RF7 1337 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 EPHB6O15197 1021 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 KLRC4O43908 158 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 CYLC1P35663 651 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 KIF5AQ12840 1032 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 SECISBP2LQ93073 1101 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 DEF6Q9H4E7 631 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 RMND1Q9NWS8 449 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 RTL9Q8NET4 1388 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 SRGNP10124 158 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 TTI2Q6NXR4 508 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 SPATA4Q8NEY3 305 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 DISC1Q9NRI5 854 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 ZNHIT6Q9NWK9 470 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-204ENST00000464764 MROH5Q6ZUA9 1318 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 MAGEB6P1A0A0J9YX57 407 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 A0A1W2PQC6 194 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 ZSCAN5CA6NGD5 496 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 IPO7O95373 1038 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 STARD3NLO95772 234 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 CPP00450 1065 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 KRT14P02533 472 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 IBSPP21815 317 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 PPFIA1Q13136 1202 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 ANKRD40Q6AI12 368 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 MMS22LQ6ZRQ5 1243 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 SALL4Q9UJQ4 1053 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 SNX12Q9UMY4 172 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 COL18A1P39060 1754 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 ESYT3A0FGR9 886 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 EIF3HO15372 352 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 FCER1AP12319 257 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 IL2RBP14784 551 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 GYG1P46976 350 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 DNM2P50570 870 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 KCNV1Q6PIU1 500 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 CCDC42Q96M95 316 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
CLCNKA-204ENST00000464764 USP17L12C9JPN9 530 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 USP17L21D6R901 530 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 ZEB2O60315 1214 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 SCG2P13521 617 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 EEF1GP26641 437 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 HNRNPH1P31943 449 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 RCAN1P53805 252 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 STK4Q13043 487 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 RPGRIP1Q96KN7 1286 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 FAM207AQ9NSI2 230 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 MTIF2P46199 727 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 IQCA1Q86XH1 822 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 C2CD5Q86YS7 1000 aa14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 CNOT6LQ96LI5 555 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-204ENST00000464764 ARHGAP20Q9P2F6 1191 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms