RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LRP10Q7Z4F1 713 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 MAP6Q96JE9 813 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 CCDC113Q9H0I3 377 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 TNFRSF10DQ9UBN6 386 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 ZMYM5Q9UJ78 669 aa9.22□□□□□ -0.93
PTCD3-205ENST00000464541 FKTNO75072 461 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
PTCD3-205ENST00000464541 HK2P52789 917 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 RBM10P98175 930 aaKnown RBP9.21□□□□□ -0.94
PTCD3-205ENST00000464541 SV2CQ496J9 727 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 LILRA2Q8N149 483 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 MKL1Q969V6 931 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.94
PTCD3-205ENST00000464541 SLC10A6Q3KNW5 377 aa9.2□□□□□ -0.94
PTCD3-205ENST00000464541 RCSD1Q6JBY9 416 aa9.2□□□□□ -0.94
PTCD3-205ENST00000464541 CYP2R1Q6VVX0 501 aa9.2□□□□□ -0.94
PTCD3-205ENST00000464541 TRIM59Q8IWR1 403 aa9.2□□□□□ -0.94
PTCD3-205ENST00000464541 MRGPRX3Q96LB0 322 aa9.2□□□□□ -0.94
PTCD3-205ENST00000464541 FCRL3Q96P31 734 aaPredicted RBP9.2□□□□□ -0.94
PTCD3-205ENST00000464541 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 AURKAO14965 403 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 PAPLNO95428 1278 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 CD3EP07766 207 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 GSTM1P09488 218 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 EEF1DP3Q658K8 133 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 SGSM3Q96HU1 749 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 ERVK13-1Q9NX77 482 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 LRP2BPQ9P2M1 347 aa9.19□□□□□ -0.94
PTCD3-205ENST00000464541 FGF10O15520 208 aaPredicted RBP9.18□□□□□ -0.94
PTCD3-205ENST00000464541 TAL1P17542 331 aaPredicted RBP9.18□□□□□ -0.94
PTCD3-205ENST00000464541 SNX17Q15036 470 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 MCTP1Q6DN14 999 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 ZNF227Q86WZ6 799 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 MYLIPQ8WY64 445 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 PPP1R14AQ96A00 147 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
PTCD3-205ENST00000464541 PDPK1O15530 556 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 KCNH1O95259 989 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 ITGAVP06756 1048 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 HHIPL1Q96JK4 782 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 SP110Q9HB58 689 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 EBF1Q9UH73 591 aa9.17□□□□□ -0.94
PTCD3-205ENST00000464541 TRBV23OR9-2A0A075B6M9 112 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 A0A1W2PQ45 241 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-205ENST00000464541 A0A1W2PQY0 241 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 FADS2P1A8MWK0 482 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 IFNGR1P15260 489 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 HLA-DQA1Q5Y7H0 255 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 GTF2IRD2BQ6EKJ0 949 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 ZPBP2Q6X784 338 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 GTF2IRD2Q86UP8 949 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 ABHD4Q8TB40 342 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
PTCD3-205ENST00000464541 NKX2-4Q9H2Z4 354 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
PTCD3-205ENST00000464541 NRDCO43847 1150 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 VAMP4O75379 141 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 TBC1D8O95759 1140 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 SEPHS1P49903 392 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 SLC14A2Q15849 920 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 KSR1Q8IVT5 923 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 LRRC47Q8N1G4 583 aaKnown RBP9.15□□□□□ -0.94
PTCD3-205ENST00000464541 PTCHD1Q96NR3 888 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 MCMBPQ9BTE3 642 aa9.15□□□□□ -0.94
PTCD3-205ENST00000464541 GPR55Q9Y2T6 319 aaPredicted RBP9.15□□□□□ -0.94
PTCD3-205ENST00000464541 C2orf71A6NGG8 1288 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 WTIPA6NIX2 430 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-205ENST00000464541 STXBP3O00186 592 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 HOXC12P31275 282 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 RASA3Q14644 834 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 KCNMB1Q16558 191 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 DPY19L1Q2PZI1 675 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 GALNT18Q6P9A2 607 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 CEP128Q6ZU80 1094 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 COPS5Q92905 334 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 OSBPL2Q9H1P3 480 aa9.14□□□□□ -0.95
PTCD3-205ENST00000464541 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
PTCD3-205ENST00000464541 USP2O75604 605 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-205ENST00000464541 CAPNS1P04632 268 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 SCG5P05408 212 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 GLI1P08151 1106 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 RTP1P59025 263 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 ERVFC1P60507 584 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 TMEM67Q5HYA8 995 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 TMEM52Q8NDY8 209 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 FAM168AQ92567 244 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
PTCD3-205ENST00000464541 A0A1W2PQU0 124 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 CPP00450 1065 aa9.12□□□□□ -0.95
PTCD3-205ENST00000464541 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
PTCD3-205ENST00000464541 HSP90AA2PQ14568 343 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms