RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 TMEM132EQ6IEE7 984 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 C6orf15Q6UXA7 325 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-210ENST00000464313 CXorf38Q8TB03 319 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 KLHL6Q8WZ60 621 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 INTS4Q96HW7 963 aaKnown RBP6.32□□□□□ -1.4
PTPN12-210ENST00000464313 HIRIP3Q9BW71 556 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-210ENST00000464313 MKRN2Q9H000 416 aaKnown RBP6.32□□□□□ -1.4
PTPN12-210ENST00000464313 GCM1Q9NP62 436 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 SUCOQ9UBS9 1254 aaKnown RBP6.32□□□□□ -1.4
PTPN12-210ENST00000464313 KCTD3Q9Y597 815 aa6.32□□□□□ -1.4
PTPN12-210ENST00000464313 SEMA7AO75326 666 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 ADRB1P08588 477 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
PTPN12-210ENST00000464313 RAB33AQ14088 237 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 NBPF12Q5TAG4 269 aaPredicted RBP6.31□□□□□ -1.4
PTPN12-210ENST00000464313 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 VHLLQ6RSH7 139 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 LILRA2Q8N149 483 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 OXR1Q8N573 874 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 TRIM55Q9BYV6 548 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
PTPN12-210ENST00000464313 RTEL1Q9NZ71 1219 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
PTPN12-210ENST00000464313 YBX2Q9Y2T7 364 aaKnown RBP6.31□□□□□ -1.4
PTPN12-210ENST00000464313 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
PTPN12-210ENST00000464313 PEX10O60683 326 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 TRIM13O60858 407 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 GJB6O95452 261 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 PDE6BP35913 854 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 SSPNQ14714 243 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 DDR2Q16832 855 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 GNPTABQ3T906 1256 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 MRM1Q6IN84 353 aaKnown RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 KIAA1211LQ6NV74 962 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 TSPYL5Q86VY4 417 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 FAM178BQ8IXR5 827 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 MARCH10Q8NA82 808 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 PHAXQ9H814 394 aaKnown RBP6.3□□□□□ -1.4
PTPN12-210ENST00000464313 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 EBF1Q9UH73 591 aa6.3□□□□□ -1.4
PTPN12-210ENST00000464313 TEX51A0A1B0GUA7 166 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 CCDC85CA6NKD9 419 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 DDAH1O94760 285 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 LTKP29376 864 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 RNF4P78317 190 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 SLC7A5Q01650 507 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 FXNQ16595 210 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 TCERG1LQ5VWI1 586 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 CCDC144CPQ8IYA2 1237 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 DTWD2Q8NBA8 298 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 DHRS1Q96LJ7 313 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 ZNF552Q9H707 407 aaPredicted RBP6.29□□□□□ -1.4
PTPN12-210ENST00000464313 CWC22Q9HCG8 908 aaKnown RBP6.29□□□□□ -1.4
PTPN12-210ENST00000464313 GPR160Q9UJ42 338 aa6.29□□□□□ -1.4
PTPN12-210ENST00000464313 SHOXO15266 292 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 SERINC3Q13530 473 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 DPH6Q7L8W6 267 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 PANK1Q8TE04 598 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
PTPN12-210ENST00000464313 SHISA3A0PJX4 238 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 U2SURPO15042 1029 aaKnown RBP6.27□□□□□ -1.41
PTPN12-210ENST00000464313 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 CELA3BP08861 270 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 NR0B2Q15466 257 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 ZXDCQ2QGD7 858 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-210ENST00000464313 NBPF9Q3BBW0 867 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 CCDC144BQ3MJ40 725 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 SIRT2Q8IXJ6 389 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 HAUS7Q99871 368 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 ZNF451Q9Y4E5 1061 aa6.27□□□□□ -1.41
PTPN12-210ENST00000464313 SUV39H1O43463 412 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 EPHX1P07099 455 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 PI3P19957 117 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
PTPN12-210ENST00000464313 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
PTPN12-210ENST00000464313 BBS9Q3SYG4 887 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 NBPF6Q5VWK0 638 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 SMARCC1Q92922 1105 aaPredicted RBP6.26□□□□□ -1.41
PTPN12-210ENST00000464313 SHISA4Q96DD7 197 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 NBPF4Q96M43 638 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 FGD4Q96M96 766 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 PRDM14Q9GZV8 571 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 SIRPGQ9P1W8 387 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 FBXL21Q9UKT6 434 aa6.26□□□□□ -1.41
PTPN12-210ENST00000464313 RFXAPO00287 272 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 MEIS1O00470 390 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 EFEMP2O95967 443 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 RASA3Q14644 834 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms