RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 CUTAO60888 179 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 GMCL1Q96IK5 515 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TIGD1Q96MW7 591 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 WRNIP1Q96S55 665 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TAF1DQ9H5J8 278 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 MYH4Q9Y623 1939 aa16.58■□□□□ 0.25
COL5A1-205ENST00000464187 POTECB2RU33 542 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 SYKP43405 635 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 NR5A1Q13285 461 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
COL5A1-205ENST00000464187 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 ZNF112Q9UJU3 913 aa16.58■□□□□ 0.24
COL5A1-205ENST00000464187 CDC25BP30305 580 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 SLC16A2P36021 539 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 EAPPQ56P03 285 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-205ENST00000464187 SPICE1Q8N0Z3 855 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
COL5A1-205ENST00000464187 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 PIGSQ96S52 555 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 NUP88Q99567 741 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-205ENST00000464187 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
COL5A1-205ENST00000464187 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
COL5A1-205ENST00000464187 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
COL5A1-205ENST00000464187 PTGS1P23219 599 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 DPCR1Q3MIW9 517 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 RILPL1Q5EBL4 403 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 C17orf53Q8N3J3 647 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 PYCARDQ9ULZ3 195 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 BECN2A8MW95 431 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 BMP3P12645 472 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 NLRP12P59046 1061 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 ZYXQ15942 572 aaKnown RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 KIAA1755Q5JYT7 1200 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
COL5A1-205ENST00000464187 VCPKMTQ9H867 229 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 SH3GLB2Q9NR46 395 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
COL5A1-205ENST00000464187 NLRP5P59047 1200 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 PRKG1Q13976 671 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL5A1-205ENST00000464187 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
COL5A1-205ENST00000464187 FBXO2Q9UK22 296 aaPredicted RBP16.55■□□□□ 0.24
COL5A1-205ENST00000464187 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
COL5A1-205ENST00000464187 STXBP3O00186 592 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 NPY5RQ15761 445 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 FEZ1Q99689 392 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 TMEM232C9JQI7 657 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 BIN1O00499 593 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
COL5A1-205ENST00000464187 KRT2P35908 639 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
COL5A1-205ENST00000464187 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 MRFAP1L1Q96HT8 127 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 BRMS1Q9HCU9 246 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
COL5A1-205ENST00000464187 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
COL5A1-205ENST00000464187 SCN4AP35499 1836 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 ZBTB5O15062 677 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 PTPRAP18433 802 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 PTPREP23469 700 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 GRIN1Q05586 938 aa16.53■□□□□ 0.24
COL5A1-205ENST00000464187 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms