RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 KIAA0355O15063 1070 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 ZBED4O75132 1171 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 BMP3P12645 472 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 MX1P20591 662 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 MCCP23508 829 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 COPB2P35606 906 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
RTN4R-204ENST00000463936 RNF180Q86T96 592 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 MSL3Q8N5Y2 521 aaKnown RBP17.1■□□□□ 0.33
RTN4R-204ENST00000463936 PURBQ96QR8 312 aaKnown RBP17.1■□□□□ 0.33
RTN4R-204ENST00000463936 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
RTN4R-204ENST00000463936 LCTP09848 1927 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.09■□□□□ 0.33
RTN4R-204ENST00000463936 PQBP1O60828 265 aaKnown RBP17.09■□□□□ 0.33
RTN4R-204ENST00000463936 CLTBP09497 229 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 TSPY3P0CV98 308 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 TSPY8P0CW00 308 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 NOVP48745 357 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 CDK7P50613 346 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 ANKRD33Q7Z3H0 272 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
RTN4R-204ENST00000463936 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
RTN4R-204ENST00000463936 FAM184BQ9ULE4 1060 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
RTN4R-204ENST00000463936 DUSP11O75319 330 aaKnown RBP17.08■□□□□ 0.32
RTN4R-204ENST00000463936 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 KCTD1Q719H9 257 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 CDX2Q99626 313 aaPredicted RBP17.08■□□□□ 0.32
RTN4R-204ENST00000463936 NAPBQ9H115 298 aa17.08■□□□□ 0.32
RTN4R-204ENST00000463936 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
RTN4R-204ENST00000463936 A1CFQ9NQ94 594 aaKnown RBP17.08■□□□□ 0.32
RTN4R-204ENST00000463936 VCANP13611 3396 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 ERC2O15083 957 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 FGRP09769 529 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 OAZ1P54368 228 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 PDE4BQ07343 736 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 GMCL1Q96IK5 515 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 FAM227BQ96M60 508 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
RTN4R-204ENST00000463936 TBX21Q9UL17 535 aa17.07■□□□□ 0.32
RTN4R-204ENST00000463936 ASGR1P07306 291 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 CST5P28325 142 aaPredicted RBP17.06■□□□□ 0.32
RTN4R-204ENST00000463936 GJA9P57773 515 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 NACAP1Q9BZK3 213 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 ABHD16BQ9H3Z7 469 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 STARD7Q9NQZ5 370 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 PDGFCQ9NRA1 345 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 LRRC37A2A6NM11 1700 aa17.06■□□□□ 0.32
RTN4R-204ENST00000463936 GRIN2DO15399 1336 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 C6orf222P0C671 652 aaPredicted RBP17.05■□□□□ 0.32
RTN4R-204ENST00000463936 SLC1A4P43007 532 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 STAT2P52630 851 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 PDE1AP54750 535 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 NKX3-2P78367 333 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 BEX3Q00994 111 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 NUCB1Q02818 461 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 ZNF287Q9HBT7 754 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 PRR12Q9ULL5 1215 aa17.05■□□□□ 0.32
RTN4R-204ENST00000463936 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 PLA2G6O60733 806 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 FGAP02671 866 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 RAG1P15918 1043 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
RTN4R-204ENST00000463936 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 TAPT1Q6NXT6 567 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
RTN4R-204ENST00000463936 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 FBXO40Q9UH90 709 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
RTN4R-204ENST00000463936 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
RTN4R-204ENST00000463936 SPTBN5Q9NRC6 3674 aaKnown RBP17.03■□□□□ 0.32
RTN4R-204ENST00000463936 TIMP1P01033 207 aa17.03■□□□□ 0.32
RTN4R-204ENST00000463936 ALAS1P13196 640 aa17.03■□□□□ 0.32
RTN4R-204ENST00000463936 SLC16A2P36021 539 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms