RNA–Protein interactions for RNA: ENST00000463574.1

HLA-B-251, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-251ENST00000463574 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 SLFN13Q68D06 897 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 SH3RF1Q7Z6J0 888 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 RIOX2Q8IUF8 465 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 RNF41Q9H4P4 317 aaPredicted RBP14.78□□□□□ -0.04
HLA-B-251ENST00000463574 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 NRBP1Q9UHY1 535 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 CTNNA3Q9UI47 895 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 UNC80Q8N2C7 3258 aa14.78□□□□□ -0.04
HLA-B-251ENST00000463574 TRIM43BA6NCK2 446 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 B4E1Z4 1266 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 VWA5AO00534 786 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 KCTD2Q14681 263 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 BMP2KLQ5H9B9 411 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 RASGRP2Q7LDG7 609 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.77□□□□□ -0.05
HLA-B-251ENST00000463574 TRIM43Q96BQ3 446 aaPredicted RBP14.77□□□□□ -0.05
HLA-B-251ENST00000463574 TINF2Q9BSI4 451 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.05
HLA-B-251ENST00000463574 KDM4AO75164 1064 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 PGK1P00558 417 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
HLA-B-251ENST00000463574 TAL1P17542 331 aaPredicted RBP14.76□□□□□ -0.05
HLA-B-251ENST00000463574 ZNF792Q3KQV3 632 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 C1orf53Q5VUE5 145 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 RNF180Q86T96 592 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 GMCL1P1Q8NEA9 526 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 SLF1Q9BQI6 1058 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 SEMA6BQ9H3T3 888 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 ZNF214Q9UL59 606 aaPredicted RBP14.76□□□□□ -0.05
HLA-B-251ENST00000463574 PHF24Q9UPV7 400 aa14.76□□□□□ -0.05
HLA-B-251ENST00000463574 DIS3Q9Y2L1 958 aaKnown RBP14.76□□□□□ -0.05
HLA-B-251ENST00000463574 BMP3P12645 472 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 MCCP23508 829 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 COPB2P35606 906 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 PPP4R3BQ5MIZ7 849 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 ESR2Q92731 530 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 KIFC2Q96AC6 838 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 CDX2Q99626 313 aaPredicted RBP14.75□□□□□ -0.05
HLA-B-251ENST00000463574 TMEM47Q9BQJ4 181 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 COL25A1Q9BXS0 654 aaPredicted RBP14.75□□□□□ -0.05
HLA-B-251ENST00000463574 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 SYNPO2Q9UMS6 1093 aa14.75□□□□□ -0.05
HLA-B-251ENST00000463574 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 CYP21A2P08686 494 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 CLTBP09497 229 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 ZNF865P0CJ78 1059 aaPredicted RBP14.74□□□□□ -0.05
HLA-B-251ENST00000463574 AKR1A1P14550 325 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 SLC1A4P43007 532 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 SMAD3P84022 425 aaKnown RBP14.74□□□□□ -0.05
HLA-B-251ENST00000463574 REPS2Q8NFH8 660 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 CNPY2Q9Y2B0 182 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 LCTP09848 1927 aa14.74□□□□□ -0.05
HLA-B-251ENST00000463574 A0A1W2PQ45 241 aaPredicted RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 A0A1W2PQY0 241 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 TOP1P11387 765 aaKnown RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 NOVP48745 357 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 IKQ13123 557 aaPredicted RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 CCDC96Q2M329 555 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 RCSD1Q6JBY9 416 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 KIAA1211Q6ZU35 1233 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 LENG1Q96BZ8 264 aaPredicted RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 KRT23Q9C075 422 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 ZSWIM5Q9P217 1185 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 TAF6LQ9Y6J9 622 aa14.73□□□□□ -0.05
HLA-B-251ENST00000463574 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 BAZ2BQ9UIF8 2168 aaKnown RBP14.73□□□□□ -0.05
HLA-B-251ENST00000463574 RAG1P15918 1043 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 ITGB8P26012 769 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 SNRNP48Q6IEG0 339 aaKnown RBP14.72□□□□□ -0.05
HLA-B-251ENST00000463574 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
HLA-B-251ENST00000463574 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 GMCL1Q96IK5 515 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 TSEN34Q9BSV6 310 aaKnown RBP14.72□□□□□ -0.05
HLA-B-251ENST00000463574 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 LSG1Q9H089 658 aaKnown RBP14.72□□□□□ -0.05
HLA-B-251ENST00000463574 TMEM39AQ9NV64 488 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 RIPK3Q9Y572 518 aa14.72□□□□□ -0.05
HLA-B-251ENST00000463574 FRMPD2Q68DX3 1309 aaPredicted RBP14.71□□□□□ -0.05
HLA-B-251ENST00000463574 KIAA0355O15063 1070 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 ADAMTS4O75173 837 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 CDC45O75419 566 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 STAT2P52630 851 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 ACLYP53396 1101 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 EPHB4P54760 987 aa14.71□□□□□ -0.05
HLA-B-251ENST00000463574 TTBK2Q6IQ55 1244 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms