RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CCSAPQ6IQ19 270 aaPredicted RBP27.6■■■□□ 2.01
SSNA1-203ENST00000463511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.6■■■□□ 2.01
SSNA1-203ENST00000463511 IFNL3Q8IZI9 196 aa27.6■■■□□ 2.01
SSNA1-203ENST00000463511 TOX2Q96NM4 488 aa27.6■■■□□ 2.01
SSNA1-203ENST00000463511 SEC62Q99442 399 aaKnown RBP27.6■■■□□ 2.01
SSNA1-203ENST00000463511 NEFLP07196 543 aa27.59■■■□□ 2.01
SSNA1-203ENST00000463511 C6orf222P0C671 652 aaPredicted RBP27.59■■■□□ 2.01
SSNA1-203ENST00000463511 GMCL1P1Q8NEA9 526 aa27.59■■■□□ 2.01
SSNA1-203ENST00000463511 HOMER2Q9NSB8 354 aa27.59■■■□□ 2.01
SSNA1-203ENST00000463511 FBXO40Q9UH90 709 aa27.59■■■□□ 2.01
SSNA1-203ENST00000463511 ISY1Q9ULR0 285 aaKnown RBP27.59■■■□□ 2.01
SSNA1-203ENST00000463511 LCTP09848 1927 aa27.59■■■□□ 2.01
SSNA1-203ENST00000463511 PATL2C9JE40 543 aaKnown RBP27.58■■■□□ 2.01
SSNA1-203ENST00000463511 TSPY3P0CV98 308 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 TSPY8P0CW00 308 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 CCDC144BQ3MJ40 725 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 SLFN13Q68D06 897 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 ARMCX2Q7L311 632 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 CHST13Q8NET6 341 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 ABHD16BQ9H3Z7 469 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 SYNPO2Q9UMS6 1093 aa27.58■■■□□ 2.01
SSNA1-203ENST00000463511 BMP3P12645 472 aa27.57■■■□□ 2
SSNA1-203ENST00000463511 CST5P28325 142 aaPredicted RBP27.57■■■□□ 2
SSNA1-203ENST00000463511 OAZ1P54368 228 aa27.57■■■□□ 2
SSNA1-203ENST00000463511 LRRFIP1Q32MZ4 808 aaKnown RBP27.57■■■□□ 2
SSNA1-203ENST00000463511 NEDD1Q8NHV4 660 aa27.57■■■□□ 2
SSNA1-203ENST00000463511 GLT1D1Q96MS3 346 aa27.57■■■□□ 2
SSNA1-203ENST00000463511 NACAP1Q9BZK3 213 aa27.57■■■□□ 2
SSNA1-203ENST00000463511 ASGR1P07306 291 aa27.56■■■□□ 2
SSNA1-203ENST00000463511 PDE4BQ07343 736 aa27.56■■■□□ 2
SSNA1-203ENST00000463511 SMC5Q8IY18 1101 aa27.56■■■□□ 2
SSNA1-203ENST00000463511 PCSK9Q8NBP7 692 aaKnown RBP27.56■■■□□ 2
SSNA1-203ENST00000463511 CHMP4CQ96CF2 233 aa27.56■■■□□ 2
SSNA1-203ENST00000463511 UPF3AQ9H1J1 476 aaKnown RBP27.56■■■□□ 2
SSNA1-203ENST00000463511 TBX21Q9UL17 535 aa27.56■■■□□ 2
SSNA1-203ENST00000463511 GBF1Q92538 1859 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 TMEM232C9JQI7 657 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 TIMP1P01033 207 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 FOSL2P15408 326 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 CCDC144CPQ8IYA2 1237 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 NAPBQ9H115 298 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 SPC25Q9HBM1 224 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 ELP1O95163 1332 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 MROH7Q68CQ1 1323 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 TTC41PQ6P2S7 1318 aa27.55■■■□□ 2
SSNA1-203ENST00000463511 STAT2P52630 851 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 TFAP4Q01664 338 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 CNTN2Q02246 1040 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 PI4K2BQ8TCG2 481 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 VTI1AQ96AJ9 217 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 FSD1Q9BTV5 496 aa27.54■■■□□ 2
SSNA1-203ENST00000463511 TMEM265A0A087WTH1 108 aa27.53■■■□□ 2
SSNA1-203ENST00000463511 SLC3A2P08195 630 aaKnown RBP27.53■■■□□ 2
SSNA1-203ENST00000463511 GJA9P57773 515 aa27.53■■■□□ 2
SSNA1-203ENST00000463511 PPARAQ07869 468 aa27.53■■■□□ 2
SSNA1-203ENST00000463511 IKQ13123 557 aaPredicted RBP27.53■■■□□ 2
SSNA1-203ENST00000463511 OTUD7AQ8TE49 926 aaPredicted RBP27.53■■■□□ 2
SSNA1-203ENST00000463511 KATNBL1Q9H079 304 aa27.53■■■□□ 2
SSNA1-203ENST00000463511 ACAD9Q9H845 621 aa27.53■■■□□ 2
SSNA1-203ENST00000463511 ERC2O15083 957 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 DNAJB2P25686 324 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 CDK7P50613 346 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 GNASQ5JWF2 1037 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 ANKRD45Q5TZF3 282 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 AGBL1Q96MI9 1066 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.52■■■□□ 2
SSNA1-203ENST00000463511 RNF146Q9NTX7 359 aa27.52■■■□□ 2
SSNA1-203ENST00000463511 ZNF536O15090 1300 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 A0A0U1RQG5 324 aaPredicted RBP27.51■■□□□ 1.99
SSNA1-203ENST00000463511 FDX1P10109 184 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 ZMYM1Q5SVZ6 1142 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 MFSD5Q6N075 450 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 FAM133AQ8N9E0 248 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 GMCL1Q96IK5 515 aa27.51■■□□□ 1.99
SSNA1-203ENST00000463511 A1CFQ9NQ94 594 aaKnown RBP27.51■■□□□ 1.99
SSNA1-203ENST00000463511 SPTBN5Q9NRC6 3674 aaKnown RBP27.51■■□□□ 1.99
SSNA1-203ENST00000463511 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.5■■□□□ 1.99
SSNA1-203ENST00000463511 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.5■■□□□ 1.99
SSNA1-203ENST00000463511 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.5■■□□□ 1.99
SSNA1-203ENST00000463511 ARVCFO00192 962 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 CTAGE5O15320 804 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 SLC1A4P43007 532 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 FAM160B2Q86V87 743 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 CHURC1Q8WUH1 139 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 MYO9BQ13459 2157 aa27.5■■□□□ 1.99
SSNA1-203ENST00000463511 MCCP23508 829 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 BEX3Q00994 111 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 PPIGQ13427 754 aaKnown RBP eCLIP27.49■■□□□ 1.99
SSNA1-203ENST00000463511 RASGRP2Q7LDG7 609 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 STAG1Q8WVM7 1258 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 PPP1R12CQ9BZL4 782 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 STX8Q9UNK0 236 aa27.49■■□□□ 1.99
SSNA1-203ENST00000463511 SOWAHBA6NEL2 793 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 TNFAIP2Q03169 654 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 GRIN2CQ14957 1233 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 KCTD1Q719H9 257 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 NOL8Q76FK4 1167 aaKnown RBP27.48■■□□□ 1.99
SSNA1-203ENST00000463511 FAM126BQ8IXS8 530 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 TRERF1Q96PN7 1200 aa27.48■■□□□ 1.99
SSNA1-203ENST00000463511 ASTN1O14525 1302 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms