RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SNAP47Q5SQN1 464 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 GIPC2Q8TF65 315 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 CHST7Q9NS84 486 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 USP40Q9NVE5 1235 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 GMIPQ9P107 970 aa6.67□□□□□ -1.34
USH2A-203ENST00000463147 A0A1W2PQ27 194 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 A0A1W2PQ64 194 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 A0A1W2PQD8 194 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 PUM1Q14671 1186 aaKnown RBP eCLIP6.66□□□□□ -1.34
USH2A-203ENST00000463147 CWF19L2Q2TBE0 894 aaKnown RBP6.66□□□□□ -1.34
USH2A-203ENST00000463147 HHIPL2Q6UWX4 724 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 RPTNQ6XPR3 784 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 FBXO33Q7Z6M2 555 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
USH2A-203ENST00000463147 FFAR3O14843 346 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 DNAJA2O60884 412 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 CLEC3AO75596 197 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 IGFBP6P24592 240 aaPredicted RBP6.65□□□□□ -1.34
USH2A-203ENST00000463147 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
USH2A-203ENST00000463147 ZPBP2Q6X784 338 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 CDADC1Q9BWV3 514 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 PRDM14Q9GZV8 571 aa6.65□□□□□ -1.34
USH2A-203ENST00000463147 ZNF205O95201 554 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 ATE1O95260 518 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 PLEKHN1Q494U1 663 aaPredicted RBP6.64□□□□□ -1.35
USH2A-203ENST00000463147 CDCP2Q5VXM1 449 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 FAM196AQ6ZSG2 479 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 GOLM1Q8NBJ4 401 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 CRELD1Q96HD1 420 aa6.64□□□□□ -1.35
USH2A-203ENST00000463147 MSL3P1P0C860 447 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 HLA-DQA1Q5Y7H0 255 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 PAQR3Q6TCH7 311 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 LRRC3Q9BY71 257 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 PCDHB12Q9Y5F1 795 aa6.63□□□□□ -1.35
USH2A-203ENST00000463147 SHROOM4Q9ULL8 1493 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 A0A1W2PQJ5 194 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 SRGAP3O43295 1099 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 PRICKLE3O43900 615 aaPredicted RBP6.62□□□□□ -1.35
USH2A-203ENST00000463147 CYBBP04839 570 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
USH2A-203ENST00000463147 NCKAP1LP55160 1127 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 SNW1Q13573 536 aaKnown RBP6.62□□□□□ -1.35
USH2A-203ENST00000463147 LIPIQ6XZB0 460 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 IMPACTQ9P2X3 320 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 SUSD2Q9UGT4 822 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
USH2A-203ENST00000463147 SH3D21A4FU49 640 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 GSNP06396 782 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 VAV1P15498 845 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 ZNF200P98182 395 aaPredicted RBP6.61□□□□□ -1.35
USH2A-203ENST00000463147 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 NT5DC1Q5TFE4 455 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 CNNM2Q9H8M5 875 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 PMF1-BGLAPU3KQ54 211 aa6.61□□□□□ -1.35
USH2A-203ENST00000463147 CTSHP09668 335 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 LIMS1P48059 325 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 RBM10P98175 930 aaKnown RBP6.6□□□□□ -1.35
USH2A-203ENST00000463147 FOXO4P98177 505 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 FAM160A1Q05DH4 1040 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
USH2A-203ENST00000463147 SAPCD2Q86UD0 394 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 MKRN2Q9H000 416 aaKnown RBP6.6□□□□□ -1.35
USH2A-203ENST00000463147 ANTXR1Q9H6X2 564 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 FBXL21Q9UKT6 434 aa6.6□□□□□ -1.35
USH2A-203ENST00000463147 F6X3S4 739 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 NCAM1P13591 858 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 CORO7P57737 925 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 VWA3BQ502W6 1294 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 NLRC3Q7RTR2 1065 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 JMJD8Q96S16 334 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 USP35Q9P2H5 1018 aa6.59□□□□□ -1.35
USH2A-203ENST00000463147 SUPT16HQ9Y5B9 1047 aaKnown RBP6.59□□□□□ -1.35
USH2A-203ENST00000463147 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 SORBS3O60504 671 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 RECKO95980 971 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 DBHP09172 617 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 VAMP1P23763 118 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
USH2A-203ENST00000463147 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
USH2A-203ENST00000463147 ATG4CQ96DT6 458 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 EHMT1Q9H9B1 1298 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 KCNQ5Q9NR82 932 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 GFOD1Q9NXC2 390 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 SRRDQ9UH36 339 aa6.58□□□□□ -1.36
USH2A-203ENST00000463147 TCF3P15923 654 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 GARTP22102 1010 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms