RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 RHPN1Q8TCX5 695 aa24.24■■□□□ 1.47
PTPN18-208ENST00000462996 CHGBP05060 677 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 NKX3-2P78367 333 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 BEX3Q00994 111 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.23■■□□□ 1.47
PTPN18-208ENST00000462996 CPXCR1Q8N123 301 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 C1QTNF1Q9BXJ1 281 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 KATNBL1Q9H079 304 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 TSPYL2Q9H2G4 693 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-208ENST00000462996 MTIF3Q9H2K0 278 aaKnown RBP24.23■■□□□ 1.47
PTPN18-208ENST00000462996 HIPK3Q9H422 1215 aa24.23■■□□□ 1.47
PTPN18-208ENST00000462996 GREB1LQ9C091 1923 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-208ENST00000462996 ATP2A1O14983 1001 aa24.22■■□□□ 1.47
PTPN18-208ENST00000462996 MYOGP15173 224 aa24.22■■□□□ 1.47
PTPN18-208ENST00000462996 CTR9Q6PD62 1173 aa24.22■■□□□ 1.47
PTPN18-208ENST00000462996 ARMCX2Q7L311 632 aa24.22■■□□□ 1.47
PTPN18-208ENST00000462996 MICALL1Q8N3F8 863 aa24.22■■□□□ 1.47
PTPN18-208ENST00000462996 PRPF38AQ8NAV1 312 aaKnown RBP24.22■■□□□ 1.47
PTPN18-208ENST00000462996 ASTN1O14525 1302 aa24.21■■□□□ 1.47
PTPN18-208ENST00000462996 KCNQ1P51787 676 aa24.21■■□□□ 1.47
PTPN18-208ENST00000462996 CCL23P55773 120 aa24.21■■□□□ 1.47
PTPN18-208ENST00000462996 AMOTL1Q8IY63 956 aa24.21■■□□□ 1.47
PTPN18-208ENST00000462996 FTSJ3Q8IY81 847 aaKnown RBP24.21■■□□□ 1.47
PTPN18-208ENST00000462996 RAVER2Q9HCJ3 691 aaKnown RBP24.21■■□□□ 1.47
PTPN18-208ENST00000462996 GRIN2DO15399 1336 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 ZBED9Q6R2W3 1325 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.2■■□□□ 1.46
PTPN18-208ENST00000462996 F5H6K3 240 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 NDUFB10O96000 172 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 KLRC3Q07444 240 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 PPP2R2DQ66LE6 453 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 CXCL17Q6UXB2 119 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 CCDC144CPQ8IYA2 1237 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 ANKRD35Q8N283 1001 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 VWCEQ96DN2 955 aa24.2■■□□□ 1.46
PTPN18-208ENST00000462996 PRRC2BQ5JSZ5 2229 aaKnown RBP24.2■■□□□ 1.46
PTPN18-208ENST00000462996 ZBED4O75132 1171 aa24.19■■□□□ 1.46
PTPN18-208ENST00000462996 NOC4LQ9BVI4 516 aaKnown RBP24.19■■□□□ 1.46
PTPN18-208ENST00000462996 WNT8AQ9H1J5 351 aa24.19■■□□□ 1.46
PTPN18-208ENST00000462996 PAG1Q9NWQ8 432 aa24.19■■□□□ 1.46
PTPN18-208ENST00000462996 CNTN2Q02246 1040 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 ITGA7Q13683 1181 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 CLASRPQ8N2M8 674 aaKnown RBP24.18■■□□□ 1.46
PTPN18-208ENST00000462996 TRPV6Q9H1D0 765 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 SLC38A10Q9HBR0 1119 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 NYAP2Q9P242 653 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 PCDHA11Q9Y5I1 949 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 SLC4A7Q9Y6M7 1214 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 SLC4A4Q9Y6R1 1079 aa24.18■■□□□ 1.46
PTPN18-208ENST00000462996 RASA1P20936 1047 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 PTGS1P23219 599 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 TNFAIP2Q03169 654 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 HSP90AB4PQ58FF6 505 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 KIFC2Q96AC6 838 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 BOLA2Q9H3K6 86 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 EPHX3Q9H6B9 360 aa24.17■■□□□ 1.46
PTPN18-208ENST00000462996 GNEQ9Y223 722 aaKnown RBP24.17■■□□□ 1.46
PTPN18-208ENST00000462996 RFXAPO00287 272 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 ERC2O15083 957 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 B4GALT4O60513 344 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 IFIT2P09913 472 aaKnown RBP24.16■■□□□ 1.46
PTPN18-208ENST00000462996 AAK1Q2M2I8 961 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 CHST13Q8NET6 341 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 DDRGK1Q96HY6 314 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 LRFN3Q9BTN0 628 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 FBXO40Q9UH90 709 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 MYH4Q9Y623 1939 aa24.16■■□□□ 1.46
PTPN18-208ENST00000462996 CABYRO75952 493 aa24.15■■□□□ 1.46
PTPN18-208ENST00000462996 SKIV2LQ15477 1246 aaKnown RBP24.15■■□□□ 1.46
PTPN18-208ENST00000462996 NOL8Q76FK4 1167 aaKnown RBP24.15■■□□□ 1.46
PTPN18-208ENST00000462996 BCL11AQ9H165 835 aa24.15■■□□□ 1.46
PTPN18-208ENST00000462996 CTDP1Q9Y5B0 961 aaPredicted RBP24.15■■□□□ 1.46
PTPN18-208ENST00000462996 MTCH2Q9Y6C9 303 aa24.15■■□□□ 1.46
PTPN18-208ENST00000462996 MYH7P12883 1935 aa24.15■■□□□ 1.46
PTPN18-208ENST00000462996 UBE3CQ15386 1083 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 FSCN1Q16658 493 aaKnown RBP24.14■■□□□ 1.45
PTPN18-208ENST00000462996 TLK2Q86UE8 772 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 RPUSD2Q8IZ73 545 aaKnown RBP24.14■■□□□ 1.45
PTPN18-208ENST00000462996 STK11IPQ8N1F8 1099 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 FAM133AQ8N9E0 248 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 KIF1BPQ96EK5 621 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 SCLYQ96I15 445 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 AGBL1Q96MI9 1066 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.14■■□□□ 1.45
PTPN18-208ENST00000462996 PUS7LQ9H0K6 701 aaKnown RBP24.14■■□□□ 1.45
PTPN18-208ENST00000462996 CLIP2Q9UDT6 1046 aa24.14■■□□□ 1.45
PTPN18-208ENST00000462996 ZBBXA8MT70 800 aa24.13■■□□□ 1.45
PTPN18-208ENST00000462996 ATP2A2P16615 1042 aaKnown RBP24.13■■□□□ 1.45
PTPN18-208ENST00000462996 POU3F3P20264 500 aaPredicted RBP24.13■■□□□ 1.45
PTPN18-208ENST00000462996 PSMC6P62333 389 aa24.13■■□□□ 1.45
PTPN18-208ENST00000462996 HOMER2Q9NSB8 354 aa24.13■■□□□ 1.45
PTPN18-208ENST00000462996 FEM1BQ9UK73 627 aa24.13■■□□□ 1.45
PTPN18-208ENST00000462996 ARIH1Q9Y4X5 557 aaPredicted RBP24.13■■□□□ 1.45
PTPN18-208ENST00000462996 DDX49Q9Y6V7 483 aaKnown RBP24.13■■□□□ 1.45
PTPN18-208ENST00000462996 IGKV6D-41A0A0C4DH26 115 aa24.12■■□□□ 1.45
PTPN18-208ENST00000462996 SOWAHBA6NEL2 793 aa24.12■■□□□ 1.45
PTPN18-208ENST00000462996 DYNC1LI2O43237 492 aaPredicted RBP24.12■■□□□ 1.45
PTPN18-208ENST00000462996 SMPD1P17405 629 aa24.12■■□□□ 1.45
PTPN18-208ENST00000462996 OAZ1P54368 228 aa24.12■■□□□ 1.45
PTPN18-208ENST00000462996 TTLL4Q14679 1199 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms