RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 ZNF543Q08ER8 600 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 TKFCQ3LXA3 575 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 PRAMEF19Q5SWL8 479 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 ENAHQ8N8S7 591 aaPredicted RBP22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 PNMA1Q8ND90 353 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 TRPV1Q8NER1 839 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 DIS3LQ8TF46 1054 aaKnown RBP22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 ANKS1AQ92625 1134 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 MAP4K1Q92918 833 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 TRERF1Q96PN7 1200 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 TINF2Q9BSI4 451 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 ACAD9Q9H845 621 aa22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 DDX20Q9UHI6 824 aaKnown RBP22.16■■□□□ 1.14
SLC6A1-204ENST00000462473 SNHG28P0DPA3 235 aa22.15■■□□□ 1.14
SLC6A1-204ENST00000462473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.15■■□□□ 1.14
SLC6A1-204ENST00000462473 RNF146Q9NTX7 359 aa22.15■■□□□ 1.14
SLC6A1-204ENST00000462473 GPATCH4Q5T3I0 446 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 RALYLQ86SE5 291 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 ESYT1Q9BSJ8 1104 aa22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 RANBP17Q9H2T7 1088 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 CCPG1Q9ULG6 757 aa22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 RBM8AQ9Y5S9 174 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 ZNFX1Q9P2E3 1918 aaKnown RBP22.14■■□□□ 1.13
SLC6A1-204ENST00000462473 DNAJC25-GNG10A0A024R161 153 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 E7EWF7 191 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 ICAM1P05362 532 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 GOLGA8HP0CJ92 632 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 IFIT1BQ5T764 474 aaKnown RBP22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 CYB5R4Q7L1T6 521 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 NCOA7Q8NI08 942 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 C11orf49Q9H6J7 331 aa22.13■■□□□ 1.13
SLC6A1-204ENST00000462473 SEPT4O43236 478 aa22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 MNX1P50219 401 aaPredicted RBP22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 MSL3Q8N5Y2 521 aaKnown RBP22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 LSG1Q9H089 658 aaKnown RBP22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 NRBP1Q9UHY1 535 aa22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 CNPY2Q9Y2B0 182 aa22.12■■□□□ 1.13
SLC6A1-204ENST00000462473 ERICH2A1L162 156 aa22.11■■□□□ 1.13
SLC6A1-204ENST00000462473 ANO1Q5XXA6 986 aa22.11■■□□□ 1.13
SLC6A1-204ENST00000462473 CASC1Q6TDU7 716 aa22.11■■□□□ 1.13
SLC6A1-204ENST00000462473 A1CFQ9NQ94 594 aaKnown RBP22.11■■□□□ 1.13
SLC6A1-204ENST00000462473 POTEB2H3BUK9 544 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 IFIT3O14879 490 aaKnown RBP22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 SEC23AQ15436 765 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 MUM1L1Q5H9M0 696 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 ZNF467Q7Z7K2 595 aaPredicted RBP22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 UBA5Q9GZZ9 404 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 ANO2Q9NQ90 1003 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 PNMA2Q9UL42 364 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 TAF6LQ9Y6J9 622 aa22.1■■□□□ 1.13
SLC6A1-204ENST00000462473 PFASO15067 1338 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 SYNGAP1Q96PV0 1343 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 EVI5O60447 810 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 PARP1P09874 1014 aaKnown RBP22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 TAL1P17542 331 aaPredicted RBP22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 ASPRV1Q53RT3 343 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 MAMDC4Q6UXC1 1216 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 NSMFQ6X4W1 530 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 STOX1Q6ZVD7 989 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 NR2E3Q9Y5X4 410 aa22.09■■□□□ 1.13
SLC6A1-204ENST00000462473 CDC45O75419 566 aa22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 SNAI1O95863 264 aaPredicted RBP22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 CNTN2Q02246 1040 aa22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 SART3Q15020 963 aaKnown RBP22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 CHST3Q7LGC8 479 aa22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 ARRDC4Q8NCT1 418 aa22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 CPVLQ9H3G5 476 aa22.08■■□□□ 1.13
SLC6A1-204ENST00000462473 H0YGN5 161 aa22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 DHX16O60231 1041 aaKnown RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 MYCNP04198 464 aaPredicted RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 ZNF865P0CJ78 1059 aaPredicted RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 FAM133AQ8N9E0 248 aa22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 CYP39A1Q9NYL5 469 aa22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 ZHX1Q9UKY1 873 aaPredicted RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 TNRC18O15417 2968 aaPredicted RBP22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 PLXNA1Q9UIW2 1896 aa22.07■■□□□ 1.12
SLC6A1-204ENST00000462473 RARBP10826 455 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 COL6A1P12109 1028 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 AKR1A1P14550 325 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 WTAPQ15007 396 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 GJC2Q5T442 439 aaPredicted RBP22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 ARMCX2Q7L311 632 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 ADGRF4Q8IZF3 695 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 FGD4Q96M96 766 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 WDR19Q8NEZ3 1342 aa22.06■■□□□ 1.12
SLC6A1-204ENST00000462473 DNM1LO00429 736 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 SLC27A2O14975 620 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 TMEM67Q5HYA8 995 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 CREB3L3Q68CJ9 461 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 CCDC144CPQ8IYA2 1237 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 MB21D2Q8IYB1 491 aaPredicted RBP22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 SENP6Q9GZR1 1112 aaPredicted RBP22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 VAT1LQ9HCJ6 419 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 FAM184BQ9ULE4 1060 aa22.05■■□□□ 1.12
SLC6A1-204ENST00000462473 PTPDC1A2A3K4 754 aa22.04■■□□□ 1.12
SLC6A1-204ENST00000462473 SOWAHBA6NEL2 793 aa22.04■■□□□ 1.12
SLC6A1-204ENST00000462473 ASB14A6NK59 587 aa22.04■■□□□ 1.12
SLC6A1-204ENST00000462473 KBTBD13C9JR72 458 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms