RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 FGRP09769 529 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 AKR1A1P14550 325 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 PDE4AP27815 886 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 NSMFQ6X4W1 530 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 RNF180Q86T96 592 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 TBC1D10CQ8IV04 446 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 USP6NLQ92738 828 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 MAML3Q96JK9 1138 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 TINF2Q9BSI4 451 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 ZNF214Q9UL59 606 aaPredicted RBP10.46□□□□□ -0.73
DDX39B-216ENST00000462421 PRR12Q9ULL5 1215 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 ADAMTS5Q9UNA0 930 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 TNKSO95271 1327 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 NEDD4P46934 1319 aa10.46□□□□□ -0.73
DDX39B-216ENST00000462421 MGAMO43451 1857 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 SEPT4O43236 478 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 ZEB2O60315 1214 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 CDC45O75419 566 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 ICAM1P05362 532 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
DDX39B-216ENST00000462421 WTAPQ15007 396 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 BMP2KLQ5H9B9 411 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 MCF2L2Q86YR7 1114 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 NPLOC4Q8TAT6 608 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 PAWRQ96IZ0 340 aaKnown RBP10.45□□□□□ -0.74
DDX39B-216ENST00000462421 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 IL17RBQ9NRM6 502 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 OGDHLQ9ULD0 1010 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
DDX39B-216ENST00000462421 ZSWIM8A7E2V4 1837 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 DNM1LO00429 736 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 SGSM2O43147 1006 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 COBLO75128 1261 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 PDHBP11177 359 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 KIF5BP33176 963 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 SLC16A2P36021 539 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 ZNF543Q08ER8 600 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 TRIM32Q13049 653 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 BRDTQ58F21 947 aaPredicted RBP10.44□□□□□ -0.74
DDX39B-216ENST00000462421 TMEM67Q5HYA8 995 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
DDX39B-216ENST00000462421 TMTC2Q8N394 836 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 CTCFLQ8NI51 663 aaPredicted RBP10.44□□□□□ -0.74
DDX39B-216ENST00000462421 VTI1AQ96AJ9 217 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 SHISA4Q96DD7 197 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 LBHD1Q9BQE6 289 aaPredicted RBP10.44□□□□□ -0.74
DDX39B-216ENST00000462421 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 XPNPEP3Q9NQH7 507 aa10.44□□□□□ -0.74
DDX39B-216ENST00000462421 FOXP2O15409 715 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 CYBAP13498 195 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 KRT32Q14532 448 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 USH1GQ495M9 461 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 NUP133Q8WUM0 1156 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 AGBL1Q96MI9 1066 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 SENP6Q9GZR1 1112 aaPredicted RBP10.43□□□□□ -0.74
DDX39B-216ENST00000462421 AP5M1Q9H0R1 490 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 RANBP17Q9H2T7 1088 aaKnown RBP10.43□□□□□ -0.74
DDX39B-216ENST00000462421 ZSWIM5Q9P217 1185 aa10.43□□□□□ -0.74
DDX39B-216ENST00000462421 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
DDX39B-216ENST00000462421 MRPL11Q9Y3B7 192 aaKnown RBP10.43□□□□□ -0.74
DDX39B-216ENST00000462421 RBM8AQ9Y5S9 174 aaKnown RBP10.43□□□□□ -0.74
DDX39B-216ENST00000462421 ABCB11O95342 1321 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 REC8O95072 547 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 GOLGA8HP0CJ92 632 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CALM1P0DP23 149 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CALM2P0DP24 149 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CALM3P0DP25 149 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CALML3P27482 149 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 MCM5P33992 734 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 GNAQP50148 359 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 PDE4DQ08499 809 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CDC37Q16543 378 aaPredicted RBP10.42□□□□□ -0.74
DDX39B-216ENST00000462421 ZNF792Q3KQV3 632 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 BTNL9Q6UXG8 535 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 RNF207Q6ZRF8 634 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 PCSK9Q8NBP7 692 aaKnown RBP10.42□□□□□ -0.74
DDX39B-216ENST00000462421 REPS2Q8NFH8 660 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 VAT1LQ9HCJ6 419 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
DDX39B-216ENST00000462421 FLRT1Q9NZU1 646 aa10.42□□□□□ -0.74
DDX39B-216ENST00000462421 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
DDX39B-216ENST00000462421 WDR19Q8NEZ3 1342 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 E7EWF7 191 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 HMGB1P09429 215 aaKnown RBP10.41□□□□□ -0.74
DDX39B-216ENST00000462421 SNAP25P60880 206 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 ACVR2BQ13705 512 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 FBXO11Q86XK2 927 aa10.41□□□□□ -0.74
DDX39B-216ENST00000462421 ENAHQ8N8S7 591 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-216ENST00000462421 CUL5Q93034 780 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms