RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ATP2A1O14983 1001 aa18.41■□□□□ 0.54
APP-211ENST00000462267 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
APP-211ENST00000462267 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
APP-211ENST00000462267 BEX3Q00994 111 aa18.41■□□□□ 0.54
APP-211ENST00000462267 TTF1Q15361 905 aaPredicted RBP18.41■□□□□ 0.54
APP-211ENST00000462267 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
APP-211ENST00000462267 SLF1Q9BQI6 1058 aa18.41■□□□□ 0.54
APP-211ENST00000462267 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
APP-211ENST00000462267 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
APP-211ENST00000462267 PRR33A8MZF0 331 aa18.4■□□□□ 0.54
APP-211ENST00000462267 PDE6AP16499 860 aa18.4■□□□□ 0.54
APP-211ENST00000462267 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
APP-211ENST00000462267 VWCEQ96DN2 955 aa18.4■□□□□ 0.54
APP-211ENST00000462267 TRPV6Q9H1D0 765 aa18.4■□□□□ 0.54
APP-211ENST00000462267 EPOPA6NHQ4 379 aa18.39■□□□□ 0.53
APP-211ENST00000462267 RAD21O60216 631 aa18.39■□□□□ 0.53
APP-211ENST00000462267 B4GALT4O60513 344 aa18.39■□□□□ 0.53
APP-211ENST00000462267 CDK8P49336 464 aa18.39■□□□□ 0.53
APP-211ENST00000462267 MRE11P49959 708 aa18.39■□□□□ 0.53
APP-211ENST00000462267 TNFAIP2Q03169 654 aa18.39■□□□□ 0.53
APP-211ENST00000462267 KRT40Q6A162 431 aa18.39■□□□□ 0.53
APP-211ENST00000462267 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
APP-211ENST00000462267 FGD4Q96M96 766 aa18.39■□□□□ 0.53
APP-211ENST00000462267 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
APP-211ENST00000462267 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
APP-211ENST00000462267 CERS4Q9HA82 394 aa18.39■□□□□ 0.53
APP-211ENST00000462267 FBXO40Q9UH90 709 aa18.39■□□□□ 0.53
APP-211ENST00000462267 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
APP-211ENST00000462267 ZEB2O60315 1214 aa18.38■□□□□ 0.53
APP-211ENST00000462267 TRIM27P14373 513 aa18.38■□□□□ 0.53
APP-211ENST00000462267 TTLL4Q14679 1199 aa18.38■□□□□ 0.53
APP-211ENST00000462267 FSCN1Q16658 493 aaKnown RBP18.38■□□□□ 0.53
APP-211ENST00000462267 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
APP-211ENST00000462267 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
APP-211ENST00000462267 LCORLQ8N3X6 602 aa18.38■□□□□ 0.53
APP-211ENST00000462267 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
APP-211ENST00000462267 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
APP-211ENST00000462267 ARNTL2Q8WYA1 636 aa18.38■□□□□ 0.53
APP-211ENST00000462267 SCLYQ96I15 445 aa18.38■□□□□ 0.53
APP-211ENST00000462267 SNX27Q96L92 541 aa18.38■□□□□ 0.53
APP-211ENST00000462267 SLC9A7Q96T83 725 aa18.38■□□□□ 0.53
APP-211ENST00000462267 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
APP-211ENST00000462267 ZBED4O75132 1171 aa18.37■□□□□ 0.53
APP-211ENST00000462267 BCAR3O75815 825 aa18.37■□□□□ 0.53
APP-211ENST00000462267 ACTN1P12814 892 aa18.37■□□□□ 0.53
APP-211ENST00000462267 TAP1Q03518 808 aa18.37■□□□□ 0.53
APP-211ENST00000462267 C12orf60Q5U649 245 aa18.37■□□□□ 0.53
APP-211ENST00000462267 C16orf86Q6ZW13 317 aa18.37■□□□□ 0.53
APP-211ENST00000462267 AMOTL1Q8IY63 956 aa18.37■□□□□ 0.53
APP-211ENST00000462267 CPXCR1Q8N123 301 aa18.37■□□□□ 0.53
APP-211ENST00000462267 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
APP-211ENST00000462267 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
APP-211ENST00000462267 CD320Q9NPF0 282 aa18.37■□□□□ 0.53
APP-211ENST00000462267 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
APP-211ENST00000462267 ASTN1O14525 1302 aa18.37■□□□□ 0.53
APP-211ENST00000462267 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
APP-211ENST00000462267 MYH8P13535 1937 aa18.36■□□□□ 0.53
APP-211ENST00000462267 SLC4A3P48751 1232 aa18.36■□□□□ 0.53
APP-211ENST00000462267 TLK2Q86UE8 772 aa18.36■□□□□ 0.53
APP-211ENST00000462267 CTDP1Q9Y5B0 961 aaPredicted RBP18.36■□□□□ 0.53
APP-211ENST00000462267 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.35■□□□□ 0.53
APP-211ENST00000462267 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
APP-211ENST00000462267 KIF28PB7ZC32 967 aa18.35■□□□□ 0.53
APP-211ENST00000462267 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
APP-211ENST00000462267 GRB10Q13322 594 aa18.35■□□□□ 0.53
APP-211ENST00000462267 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
APP-211ENST00000462267 ALDH8A1Q9H2A2 487 aaPredicted RBP18.35■□□□□ 0.53
APP-211ENST00000462267 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
APP-211ENST00000462267 MCM3APO60318 1980 aa18.35■□□□□ 0.53
APP-211ENST00000462267 DYNC1LI2O43237 492 aaPredicted RBP18.34■□□□□ 0.53
APP-211ENST00000462267 GJD3Q8N144 294 aa18.34■□□□□ 0.53
APP-211ENST00000462267 KCNH6Q9H252 994 aa18.34■□□□□ 0.53
APP-211ENST00000462267 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
APP-211ENST00000462267 SLC38A10Q9HBR0 1119 aa18.34■□□□□ 0.53
APP-211ENST00000462267 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
APP-211ENST00000462267 Q9Y3F1 56 aa18.34■□□□□ 0.53
APP-211ENST00000462267 BRWD1Q9NSI6 2320 aa18.34■□□□□ 0.53
APP-211ENST00000462267 CYP2D7A0A087X1C5 515 aa18.33■□□□□ 0.52
APP-211ENST00000462267 ASB14A6NK59 587 aa18.33■□□□□ 0.52
APP-211ENST00000462267 USP17L12C9JPN9 530 aa18.33■□□□□ 0.52
APP-211ENST00000462267 USP17L21D6R901 530 aa18.33■□□□□ 0.52
APP-211ENST00000462267 PRKAB2O43741 272 aa18.33■□□□□ 0.52
APP-211ENST00000462267 LPXNO60711 386 aa18.33■□□□□ 0.52
APP-211ENST00000462267 ALADP13716 330 aa18.33■□□□□ 0.52
APP-211ENST00000462267 RFC2P35250 354 aa18.33■□□□□ 0.52
APP-211ENST00000462267 OAZ1P54368 228 aa18.33■□□□□ 0.52
APP-211ENST00000462267 PSMC6P62333 389 aa18.33■□□□□ 0.52
APP-211ENST00000462267 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
APP-211ENST00000462267 AACSQ86V21 672 aa18.33■□□□□ 0.52
APP-211ENST00000462267 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.52
APP-211ENST00000462267 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.52
APP-211ENST00000462267 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.52
APP-211ENST00000462267 F5H6K3 240 aa18.32■□□□□ 0.52
APP-211ENST00000462267 ARHGEF15O94989 841 aa18.32■□□□□ 0.52
APP-211ENST00000462267 NDUFB10O96000 172 aa18.32■□□□□ 0.52
APP-211ENST00000462267 SMPD1P17405 629 aa18.32■□□□□ 0.52
APP-211ENST00000462267 NHLH1Q02575 133 aa18.32■□□□□ 0.52
APP-211ENST00000462267 KLRC3Q07444 240 aa18.32■□□□□ 0.52
APP-211ENST00000462267 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
APP-211ENST00000462267 FAM178BQ8IXR5 827 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms