RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-222ENST00000462212 LHX8Q68G74 356 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 KIAA1211Q6ZU35 1233 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 STOX1Q6ZVD7 989 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 CHMP4CQ96CF2 233 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 FBXO40Q9UH90 709 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
ITSN1-222ENST00000462212 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
ITSN1-222ENST00000462212 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
ITSN1-222ENST00000462212 CDC45O75419 566 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 FARP2O94887 1054 aaPredicted RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 ICAM1P05362 532 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 PGK2P07205 417 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 SLC16A2P36021 539 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 TRDNQ13061 729 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 NECTIN1Q15223 517 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 TKFCQ3LXA3 575 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 MB21D2Q8IYB1 491 aaPredicted RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 MSL3Q8N5Y2 521 aaKnown RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 ANKLE1Q8NAG6 615 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 TRPV1Q8NER1 839 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 NCOA7Q8NI08 942 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 UBAC1Q9BSL1 405 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 KAT14Q9H8E8 782 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 GPCPD1Q9NPB8 672 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 NRBP1Q9UHY1 535 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 ISY1Q9ULR0 285 aaKnown RBP9.79□□□□□ -0.84
ITSN1-222ENST00000462212 MTMR7Q9Y216 660 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
ITSN1-222ENST00000462212 MSCO60682 206 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 TFRCP02786 760 aaKnown RBP9.78□□□□□ -0.84
ITSN1-222ENST00000462212 ANTXR2P58335 489 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 SNAP25P60880 206 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 IFIT1BQ5T764 474 aaKnown RBP9.78□□□□□ -0.84
ITSN1-222ENST00000462212 CCDC174Q6PII3 467 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 MAMDC4Q6UXC1 1216 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
ITSN1-222ENST00000462212 RALYLQ86SE5 291 aaKnown RBP9.78□□□□□ -0.84
ITSN1-222ENST00000462212 FGD4Q96M96 766 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 TRERF1Q96PN7 1200 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 TINF2Q9BSI4 451 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 MTA3Q9BTC8 594 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 RNF146Q9NTX7 359 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 DDX20Q9UHI6 824 aaKnown RBP9.78□□□□□ -0.84
ITSN1-222ENST00000462212 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 CEP290O15078 2479 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 WDR19Q8NEZ3 1342 aa9.78□□□□□ -0.84
ITSN1-222ENST00000462212 SLC27A2O14975 620 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 SEPT4O43236 478 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 GOLGA8HP0CJ92 632 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 CASC1Q6TDU7 716 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 ANKRD35Q8N283 1001 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 FAM133AQ8N9E0 248 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 IGDCC4Q8TDY8 1250 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 DDX11Q96FC9 970 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 A1CFQ9NQ94 594 aaKnown RBP9.77□□□□□ -0.85
ITSN1-222ENST00000462212 HOMER2Q9NSB8 354 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 CCPG1Q9ULG6 757 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 SYNGAP1Q96PV0 1343 aa9.77□□□□□ -0.85
ITSN1-222ENST00000462212 LCTP09848 1927 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 MCM3APO60318 1980 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 PALM3A6NDB9 673 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 IFIT3O14879 490 aaKnown RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 SNAI1O95863 264 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 PARP1P09874 1014 aaKnown RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 ZNF865P0CJ78 1059 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 ALAS1P13196 640 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 TAL1P17542 331 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 TROAPQ12815 778 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 SART3Q15020 963 aaKnown RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 TSGA10IPQ3SY00 556 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 DIS3LQ8TF46 1054 aaKnown RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 PAWRQ96IZ0 340 aaKnown RBP9.76□□□□□ -0.85
ITSN1-222ENST00000462212 CPVLQ9H3G5 476 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 SENP2Q9HC62 589 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 MAD2L2Q9UI95 211 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 PFASO15067 1338 aa9.76□□□□□ -0.85
ITSN1-222ENST00000462212 ERICH2A1L162 156 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 COL6A1P12109 1028 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 CNTN2Q02246 1040 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 GRM4Q14833 912 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 WTAPQ15007 396 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 TMEM67Q5HYA8 995 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
ITSN1-222ENST00000462212 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
ITSN1-222ENST00000462212 NECAB2Q7Z6G3 386 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms