RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TMEM47Q9BQJ4 181 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 PRR12Q9ULL5 1215 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 MTMR7Q9Y216 660 aa22.36■■□□□ 1.17
VARS-220ENST00000461874 AKR1A1P14550 325 aa22.35■■□□□ 1.17
VARS-220ENST00000461874 MAGEA10P43363 369 aaPredicted RBP22.35■■□□□ 1.17
VARS-220ENST00000461874 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
VARS-220ENST00000461874 FGD4Q96M96 766 aa22.35■■□□□ 1.17
VARS-220ENST00000461874 RNF41Q9H4P4 317 aaPredicted RBP22.35■■□□□ 1.17
VARS-220ENST00000461874 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
VARS-220ENST00000461874 XPNPEP3Q9NQH7 507 aa22.35■■□□□ 1.17
VARS-220ENST00000461874 DNAH12Q6ZR08 3092 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 PDE4AP27815 886 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 CCDC96Q2M329 555 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 TTC14Q96N46 770 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 RNF146Q9NTX7 359 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 SMCHD1A6NHR9 2005 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 SZT2Q5T011 3432 aa22.34■■□□□ 1.17
VARS-220ENST00000461874 LAMA3Q16787 3333 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 PLXNA1Q9UIW2 1896 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 ZNF213O14771 459 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 ADCYAP1R1P41586 468 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 RTP1P59025 263 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 SNAP25P60880 206 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 CCDC174Q6PII3 467 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 SLC39A5Q6ZMH5 540 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
VARS-220ENST00000461874 PGK1P00558 417 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 ALAS1P13196 640 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
VARS-220ENST00000461874 TTBK2Q6IQ55 1244 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 RNF180Q86T96 592 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 ESR2Q92731 530 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 A1CFQ9NQ94 594 aaKnown RBP22.32■■□□□ 1.16
VARS-220ENST00000461874 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.32■■□□□ 1.16
VARS-220ENST00000461874 FAM184BQ9ULE4 1060 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 PHF24Q9UPV7 400 aa22.32■■□□□ 1.16
VARS-220ENST00000461874 NEDD4P46934 1319 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 CNTN2Q02246 1040 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 ACVR2BQ13705 512 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 SNX17Q15036 470 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 FAM133AQ8N9E0 248 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 FERMT2Q96AC1 680 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 LENG1Q96BZ8 264 aaPredicted RBP22.31■■□□□ 1.16
VARS-220ENST00000461874 DSCC1Q9BVC3 393 aa22.31■■□□□ 1.16
VARS-220ENST00000461874 ZHX1Q9UKY1 873 aaPredicted RBP22.31■■□□□ 1.16
VARS-220ENST00000461874 ADAMTS4O75173 837 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 ICAM1P05362 532 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 PDHBP11177 359 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 SLC16A2P36021 539 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 NT5C2P49902 561 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 SYDE2Q5VT97 1194 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 ARMCX2Q7L311 632 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 UBE2OQ9C0C9 1292 aaKnown RBP22.3■■□□□ 1.16
VARS-220ENST00000461874 RANBP17Q9H2T7 1088 aaKnown RBP22.3■■□□□ 1.16
VARS-220ENST00000461874 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 ATP11BQ9Y2G3 1177 aa22.3■■□□□ 1.16
VARS-220ENST00000461874 FRMPD2Q68DX3 1309 aaPredicted RBP22.3■■□□□ 1.16
VARS-220ENST00000461874 GSPT1P15170 499 aaKnown RBP22.29■■□□□ 1.16
VARS-220ENST00000461874 TTC22Q5TAA0 569 aa22.29■■□□□ 1.16
VARS-220ENST00000461874 C1orf53Q5VUE5 145 aa22.29■■□□□ 1.16
VARS-220ENST00000461874 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
VARS-220ENST00000461874 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
VARS-220ENST00000461874 SOWAHBA6NEL2 793 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 SOX1O00570 391 aaPredicted RBP22.28■■□□□ 1.16
VARS-220ENST00000461874 SNHG28P0DPA3 235 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 MDM2Q00987 491 aaPredicted RBP22.28■■□□□ 1.16
VARS-220ENST00000461874 TRIM60Q495X7 471 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 MUM1L1Q5H9M0 696 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 DGKHQ86XP1 1220 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 ZKSCAN3Q9BRR0 538 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 TSEN34Q9BSV6 310 aaKnown RBP22.28■■□□□ 1.16
VARS-220ENST00000461874 IL25Q9H293 177 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 CTNNA3Q9UI47 895 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 SYNRGQ9UMZ2 1314 aa22.28■■□□□ 1.16
VARS-220ENST00000461874 KDM4AO75164 1064 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 DUSP11O75319 330 aaKnown RBP22.27■■□□□ 1.16
VARS-220ENST00000461874 ZNF543Q08ER8 600 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 IMMTQ16891 758 aaKnown RBP22.27■■□□□ 1.16
VARS-220ENST00000461874 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 TDHQ8IZJ6 230 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 KLHDC9Q8NEP7 349 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 KATNBL1Q9H079 304 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 CYP39A1Q9NYL5 469 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 PRKAG2Q9UGJ0 569 aa22.27■■□□□ 1.16
VARS-220ENST00000461874 ASB14A6NK59 587 aa22.26■■□□□ 1.15
VARS-220ENST00000461874 CCDC178Q5BJE1 867 aa22.26■■□□□ 1.15
VARS-220ENST00000461874 IQCA1Q86XH1 822 aa22.26■■□□□ 1.15
VARS-220ENST00000461874 LBHD1Q9BQE6 289 aaPredicted RBP22.26■■□□□ 1.15
VARS-220ENST00000461874 A0A1W2PQ45 241 aaPredicted RBP22.25■■□□□ 1.15
VARS-220ENST00000461874 A0A1W2PQY0 241 aa22.25■■□□□ 1.15
VARS-220ENST00000461874 B4E1Z4 1266 aa22.25■■□□□ 1.15
VARS-220ENST00000461874 ADCY6O43306 1168 aa22.25■■□□□ 1.15
VARS-220ENST00000461874 CCSAPQ6IQ19 270 aaPredicted RBP22.25■■□□□ 1.15
VARS-220ENST00000461874 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
VARS-220ENST00000461874 ANKS1AQ92625 1134 aa22.25■■□□□ 1.15
VARS-220ENST00000461874 LRCH3Q96II8 777 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms