RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
SCNM1-204ENST00000461862 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 EPB41L4AQ9HCS5 686 aaPredicted RBP12.14□□□□□ -0.47
SCNM1-204ENST00000461862 SUGT1Q9Y2Z0 365 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 SBF1O95248 1867 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
SCNM1-204ENST00000461862 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 LDHCP07864 332 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 PRDX5P30044 214 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 MCM5P33992 734 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 TXLNAP40222 546 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 TDO2P48775 406 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
SCNM1-204ENST00000461862 CNNM2Q9H8M5 875 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 TPCN1Q9ULQ1 816 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 PSME4Q14997 1843 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 FOCADQ5VW36 1801 aa12.13□□□□□ -0.47
SCNM1-204ENST00000461862 ZNF541Q9H0D2 1346 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
SCNM1-204ENST00000461862 ATP9BO43861 1147 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 PCP11498 1178 aaKnown RBP12.12□□□□□ -0.47
SCNM1-204ENST00000461862 NT5C2P49902 561 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 HAND2P61296 217 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 FGD1P98174 961 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 ME3Q16798 604 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 AOC3Q16853 763 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 Q6ZUG5 572 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
SCNM1-204ENST00000461862 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
SCNM1-204ENST00000461862 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
SCNM1-204ENST00000461862 GDF2Q9UK05 429 aaPredicted RBP12.12□□□□□ -0.47
SCNM1-204ENST00000461862 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-204ENST00000461862 LARGE1O95461 756 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 BAG3O95817 575 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
SCNM1-204ENST00000461862 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-204ENST00000461862 TBCELQ5QJ74 424 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 TBC1D10CQ8IV04 446 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 GALNT6Q8NCL4 622 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 KRT23Q9C075 422 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 ATP8A2Q9NTI2 1148 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 DDX60LQ5H9U9 1706 aaKnown RBP12.11□□□□□ -0.47
SCNM1-204ENST00000461862 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
SCNM1-204ENST00000461862 PRC1O43663 620 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 PRKAB2O43741 272 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 LMNB1P20700 586 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 PTMSP20962 102 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 EVCP57679 992 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 FKBP1AP62942 108 aaKnown RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 MFSD14BQ5SR56 506 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 TRIM50Q86XT4 487 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 TPCN2Q8NHX9 752 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 BRF1Q92994 677 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 ZNF274Q96GC6 653 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-204ENST00000461862 GAKO14976 1311 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
SCNM1-204ENST00000461862 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 PHF20L1A8MW92 1017 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 PFKFB2O60825 505 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 MAPTP10636 758 aaKnown RBP12.09□□□□□ -0.47
SCNM1-204ENST00000461862 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
SCNM1-204ENST00000461862 TNP2Q05952 138 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 PPARAQ07869 468 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 SLCO4C1Q6ZQN7 724 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 PODNQ7Z5L7 613 aa12.09□□□□□ -0.47
SCNM1-204ENST00000461862 BEND7Q8N7W2 519 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms