RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 NCOA5Q9HCD5 579 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
SSBP1-202ENST00000461433 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
SSBP1-202ENST00000461433 PFKFB2O60825 505 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 ZBED4O75132 1171 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 GNAQP50148 359 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 OAZ1P54368 228 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
SSBP1-202ENST00000461433 STK3Q13188 491 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
SSBP1-202ENST00000461433 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 PORCNQ9H237 461 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
SSBP1-202ENST00000461433 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
SSBP1-202ENST00000461433 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 STAT3P40763 770 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 LACTBP83111 547 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-202ENST00000461433 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 SCRN1Q12765 414 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 CDC37Q16543 378 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-202ENST00000461433 CCDC174Q6PII3 467 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 PIGSQ96S52 555 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 ARHGAP39Q9C0H5 1083 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 CNTNAP5Q8WYK1 1306 aa13.1□□□□□ -0.31
SSBP1-202ENST00000461433 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 PPP1R11O60927 126 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-202ENST00000461433 FKTNO75072 461 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 ICAM1P05362 532 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-202ENST00000461433 LBX1P52954 281 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 PLS1Q14651 629 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 TEX13BQ9BXU2 312 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
SSBP1-202ENST00000461433 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 ZBTB5O15062 677 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.31
SSBP1-202ENST00000461433 ST18O60284 1047 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.31
SSBP1-202ENST00000461433 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.31
SSBP1-202ENST00000461433 NECAB1Q8N987 351 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.31
SSBP1-202ENST00000461433 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.31
SSBP1-202ENST00000461433 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.32
SSBP1-202ENST00000461433 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-202ENST00000461433 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 IFNAR1P17181 557 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 ERCC3P19447 782 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 CCNA1P78396 465 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
SSBP1-202ENST00000461433 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-202ENST00000461433 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 hCG_1642624A0A1W2PR95 340 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 SLC25A27O95847 323 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 PSMC4P43686 418 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 HOMER1Q86YM7 354 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 PHKBQ93100 1093 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
SSBP1-202ENST00000461433 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-202ENST00000461433 CCPG1Q9ULG6 757 aa13.07□□□□□ -0.32
SSBP1-202ENST00000461433 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-202ENST00000461433 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
SSBP1-202ENST00000461433 DTNBO60941 627 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 MAPK4P31152 587 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 PKN1Q16512 942 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 MUM1L1Q5H9M0 696 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 MROH8Q9H579 483 aa13.06□□□□□ -0.32
SSBP1-202ENST00000461433 PPFIA3O75145 1194 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 ALAS1P13196 640 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 FCGRTP55899 365 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 TKFCQ3LXA3 575 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 USH1GQ495M9 461 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSBP1-202ENST00000461433 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 OPLAHO14841 1288 aa13.05□□□□□ -0.32
SSBP1-202ENST00000461433 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-202ENST00000461433 PTPREP23469 700 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms