RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ITIH2P19823 946 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 GRIA2P42262 883 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 NMIQ13287 307 aaPredicted RBP4.43□□□□□ -1.7
VCL-203ENST00000461383 GRB10Q13322 594 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 SNW1Q13573 536 aaKnown RBP4.43□□□□□ -1.7
VCL-203ENST00000461383 CBX2Q14781 532 aaPredicted RBP4.43□□□□□ -1.7
VCL-203ENST00000461383 DPY19L1Q2PZI1 675 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 FNDC3BQ53EP0 1204 aaKnown RBP4.43□□□□□ -1.7
VCL-203ENST00000461383 GTF2IRD2BQ6EKJ0 949 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 SEZ6L2Q6UXD5 910 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 TMC3Q7Z5M5 1100 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 GTF2IRD2Q86UP8 949 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 ARHGEF39Q8N4T4 335 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 FBXL6Q8N531 539 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 DTWD2Q8NBA8 298 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 SHKBP1Q8TBC3 707 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 KCTD13Q8WZ19 329 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 MRGPRX3Q96LB0 322 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 PRR13Q9NZ81 148 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 NDOR1Q9UHB4 597 aa4.43□□□□□ -1.7
VCL-203ENST00000461383 DNAJC25-GNG10A0A024R161 153 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 SSU72P8A0A1W2PR75 194 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 VAMP4O75379 141 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 PRAMEF1O95521 474 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 HOXC12P31275 282 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 SOX5P35711 763 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 ECI1P42126 302 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 POU4F1Q01851 419 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 CYP27A1Q02318 531 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 DUSP27Q5VZP5 1158 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 CNNM4Q6P4Q7 775 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 OGFOD3Q6PK18 319 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 MFSD4AQ8N468 514 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 ZNF513Q8N8E2 541 aaPredicted RBP4.42□□□□□ -1.7
VCL-203ENST00000461383 KISS1RQ969F8 398 aaPredicted RBP4.42□□□□□ -1.7
VCL-203ENST00000461383 CCDC140Q96MF4 163 aa4.42□□□□□ -1.7
VCL-203ENST00000461383 MRPL4Q9BYD3 311 aaKnown RBP4.42□□□□□ -1.7
VCL-203ENST00000461383 GPR55Q9Y2T6 319 aaPredicted RBP4.42□□□□□ -1.7
VCL-203ENST00000461383 H0Y8X5 98 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 PDE8AO60658 829 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 RFPL3O75679 317 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 CPP00450 1065 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 PRNPP04156 253 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 GSNP06396 782 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 CD3EP07766 207 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 YBX3P16989 372 aaKnown RBP eCLIP4.41□□□□□ -1.72e-10■■■□□ 14.8
VCL-203ENST00000461383 NOP2P46087 812 aaKnown RBP4.41□□□□□ -1.7
VCL-203ENST00000461383 GABREP78334 506 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 MSMPQ1L6U9 139 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 TM4SF20Q53R12 229 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 USP53Q70EK8 1073 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 ZAR1Q86SH2 424 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 PIWIL2Q8TC59 973 aaKnown RBP4.41□□□□□ -1.7
VCL-203ENST00000461383 OSBP2Q969R2 916 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 MFSD14AQ96MC6 490 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 NKX2-4Q9H2Z4 354 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 TRIT1Q9H3H1 467 aaKnown RBP4.41□□□□□ -1.7
VCL-203ENST00000461383 GPATCH2Q9NW75 528 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
VCL-203ENST00000461383 ARID1BQ8NFD5 2236 aaPredicted RBP4.41□□□□□ -1.7
VCL-203ENST00000461383 BLACEA4D250 179 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 FAM170BA6NMN3 283 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 PRR33A8MZF0 331 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 STXBP3O00186 592 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 OPA1O60313 960 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 DLX3O60479 287 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 EFCAB14O75071 495 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 RAB11FIP3O75154 756 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 WNT11O96014 354 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 ADMP35318 185 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 GFRA1P56159 465 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 TNK2Q07912 1038 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 SCRN1Q12765 414 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 MAP4K2Q12851 820 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 SF1Q15637 639 aaKnown RBP4.4□□□□□ -1.71
VCL-203ENST00000461383 CDKAL1Q5VV42 579 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 WWC2Q6AWC2 1192 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 CRTC3Q6UUV7 619 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 ZNF765Q7L2R6 523 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 KSR1Q8IVT5 923 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 ENOX1Q8TC92 643 aaKnown RBP4.4□□□□□ -1.71
VCL-203ENST00000461383 PTPRN2Q92932 1015 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 Q96M66 194 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 CLUHP3Q96NS8 147 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 CAAP1Q9H8G2 361 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 CYP26B1Q9NR63 512 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 ATG3Q9NT62 314 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 PIM2Q9P1W9 311 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 MAGEC2Q9UBF1 373 aaPredicted RBP4.4□□□□□ -1.71
VCL-203ENST00000461383 MINPP1Q9UNW1 487 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 CNTNAP4Q9C0A0 1308 aa4.4□□□□□ -1.71
VCL-203ENST00000461383 SHISA3A0PJX4 238 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 IGF2BP3O00425 579 aaKnown RBP eCLIP4.39□□□□□ -1.71
VCL-203ENST00000461383 ZNF865P0CJ78 1059 aaPredicted RBP4.39□□□□□ -1.71
VCL-203ENST00000461383 CPEP16870 476 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 FLT3P36888 993 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 STAT3P40763 770 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 SEPHS1P49903 392 aa4.39□□□□□ -1.71
VCL-203ENST00000461383 NEK4P51957 841 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms