RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 K7ENM7 598 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 PPP2R5AQ15172 486 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SRRM1Q8IYB3 904 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 TRMT44Q8IYL2 757 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 LPIN2Q92539 896 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ATP6V1E2Q96A05 226 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 PPWD1Q96BP3 646 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 CEP19Q96LK0 163 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 METTL22Q9BUU2 404 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 AATFQ9NY61 560 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SCHIP1Q9P0W5 487 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 F8W8V4 182 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 H7C1D1 291 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 NVLO15381 856 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 XPOTO43592 962 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 HEXIM1O94992 359 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 ABL1P00519 1130 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 NSFP46459 744 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 BZW2Q9Y6E2 419 aaKnown RBP9.82□□□□□ -0.84
BRCA1-205ENST00000461221 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
BRCA1-205ENST00000461221 SYF2O95926 243 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 TMEM191BP0C7N4 346 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 TSTA3Q13630 321 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 RPAINQ86UA6 219 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 SMCO2A6NFE2 343 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 ADKP55263 362 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 PNOCQ13519 176 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 ARHGEF16Q5VV41 709 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 GALNT17Q6IS24 598 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 METTL13Q8N6R0 699 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 KBTBD3Q8NAB2 608 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 KIFC3Q9BVG8 833 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 INTS9Q9NV88 658 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 PANK4Q9NVE7 773 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 TEKT2Q9UIF3 430 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 MID2Q9UJV3 735 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 PDE6AP16499 860 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 EEF1GP26641 437 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 VPS41P49754 854 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 CAPN12Q6ZSI9 719 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 GDAP1L1Q96MZ0 367 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 C8orf37Q96NL8 207 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 KRT82Q9NSB4 513 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 PPP2R2CQ9Y2T4 447 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 EEF1DP29692 281 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 LIG3P49916 1009 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 ADALQ6DHV7 355 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 RFX6Q8HWS3 928 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 TRIM15Q9C019 465 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 ZNF408Q9H9D4 720 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 MRPL11Q9Y3B7 192 aaKnown RBP9.81□□□□□ -0.84
BRCA1-205ENST00000461221 COL4A3BPQ9Y5P4 624 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 KIAA0586Q9BVV6 1533 aa9.81□□□□□ -0.84
BRCA1-205ENST00000461221 MCF2L2Q86YR7 1114 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 FGD4Q96M96 766 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 DSCC1Q9BVC3 393 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ANGPTL2Q9UKU9 493 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 BUB1O43683 1085 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PRDM1O75626 825 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ARMC9Q7Z3E5 817 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 KRT26Q7Z3Y9 468 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 GPIHBP1Q8IV16 184 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 FAM81BQ96LP2 452 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 TEKT3Q9BXF9 490 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PLEKHA4Q9H4M7 779 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 MAGEF1Q9HAY2 307 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ZC4H2Q9NQZ6 224 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SUCLA2Q9P2R7 463 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 KCNJ14Q9UNX9 436 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 RPRD2Q5VT52 1461 aaKnown RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SGSM2O43147 1006 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 HOXB7P09629 217 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PEX19P40855 299 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 MFAP3P55082 362 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 RCN2Q14257 317 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 MCUQ8NE86 351 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PHKBQ93100 1093 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SMYD2Q9NRG4 433 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 TXLNGQ9NUQ3 528 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SCOCQ9UIL1 159 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 DENND4BO75064 1496 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PIK3CAP42336 1068 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 XKR9Q5GH70 373 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 OTUD7BQ6GQQ9 843 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 ARHGEF18Q6ZSZ5 1173 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 PRPF38AQ8NAV1 312 aaKnown RBP9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SPATA5Q8NB90 893 aa9.8□□□□□ -0.84
BRCA1-205ENST00000461221 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms