RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ANKLE1Q8NAG6 615 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 PNMA1Q8ND90 353 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 AGBL1Q96MI9 1066 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 OGDHLQ9ULD0 1010 aa26.39■■□□□ 1.82
TRAF4-207ENST00000461195 RBM8AQ9Y5S9 174 aaKnown RBP26.39■■□□□ 1.82
TRAF4-207ENST00000461195 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
TRAF4-207ENST00000461195 SNAP25P60880 206 aa26.38■■□□□ 1.81
TRAF4-207ENST00000461195 TKFCQ3LXA3 575 aa26.38■■□□□ 1.81
TRAF4-207ENST00000461195 HOMER2Q9NSB8 354 aa26.38■■□□□ 1.81
TRAF4-207ENST00000461195 COLQQ9Y215 455 aaPredicted RBP26.38■■□□□ 1.81
TRAF4-207ENST00000461195 CYBAP13498 195 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 CNGA1P29973 690 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 FXR1P51114 621 aaKnown RBP eCLIP26.37■■□□□ 1.81
TRAF4-207ENST00000461195 GPATCH4Q5T3I0 446 aaKnown RBP26.37■■□□□ 1.81
TRAF4-207ENST00000461195 LHX8Q68G74 356 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 ANKRD35Q8N283 1001 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 TRPV1Q8NER1 839 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 LSG1Q9H089 658 aaKnown RBP26.37■■□□□ 1.81
TRAF4-207ENST00000461195 RANBP17Q9H2T7 1088 aaKnown RBP26.37■■□□□ 1.81
TRAF4-207ENST00000461195 ACAD9Q9H845 621 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 FRMPD3Q5JV73 1810 aa26.37■■□□□ 1.81
TRAF4-207ENST00000461195 DNAJC25-GNG10A0A024R161 153 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 E7EWF7 191 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 MSCO60682 206 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 RALYLQ86SE5 291 aaKnown RBP26.36■■□□□ 1.81
TRAF4-207ENST00000461195 NCOA7Q8NI08 942 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 RNF146Q9NTX7 359 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 TAF6LQ9Y6J9 622 aa26.36■■□□□ 1.81
TRAF4-207ENST00000461195 ICAM1P05362 532 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 ALAS1P13196 640 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 IFIT1BQ5T764 474 aaKnown RBP26.35■■□□□ 1.81
TRAF4-207ENST00000461195 CASC1Q6TDU7 716 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 TRERF1Q96PN7 1200 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 TINF2Q9BSI4 451 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 HTATIP2Q9BUP3 242 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 DDX20Q9UHI6 824 aaKnown RBP26.35■■□□□ 1.81
TRAF4-207ENST00000461195 CCPG1Q9ULG6 757 aa26.35■■□□□ 1.81
TRAF4-207ENST00000461195 TRIOBPQ9H2D6 2365 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 H0YGN5 161 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 SEC23AQ15436 765 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 NECAB2Q7Z6G3 386 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 PAWRQ96IZ0 340 aaKnown RBP26.34■■□□□ 1.81
TRAF4-207ENST00000461195 ANO2Q9NQ90 1003 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 NRBP1Q9UHY1 535 aa26.34■■□□□ 1.81
TRAF4-207ENST00000461195 CDC45O75419 566 aa26.33■■□□□ 1.81
TRAF4-207ENST00000461195 GOLGA8HP0CJ92 632 aa26.33■■□□□ 1.81
TRAF4-207ENST00000461195 PRAMEF19Q5SWL8 479 aa26.33■■□□□ 1.81
TRAF4-207ENST00000461195 STOX1Q6ZVD7 989 aa26.33■■□□□ 1.81
TRAF4-207ENST00000461195 MSL3Q8N5Y2 521 aaKnown RBP26.33■■□□□ 1.81
TRAF4-207ENST00000461195 DIS3LQ8TF46 1054 aaKnown RBP26.33■■□□□ 1.81
TRAF4-207ENST00000461195 ASPRV1Q53RT3 343 aa26.32■■□□□ 1.8
TRAF4-207ENST00000461195 ZNF467Q7Z7K2 595 aaPredicted RBP26.32■■□□□ 1.8
TRAF4-207ENST00000461195 PNMA2Q9UL42 364 aa26.32■■□□□ 1.8
TRAF4-207ENST00000461195 SMCHD1A6NHR9 2005 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 ERICH2A1L162 156 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 SEPT4O43236 478 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 MNX1P50219 401 aaPredicted RBP26.31■■□□□ 1.8
TRAF4-207ENST00000461195 ERICH6BQ5W0A0 696 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 DPF3Q92784 378 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 A1CFQ9NQ94 594 aaKnown RBP26.31■■□□□ 1.8
TRAF4-207ENST00000461195 PFASO15067 1338 aa26.31■■□□□ 1.8
TRAF4-207ENST00000461195 IFIT3O14879 490 aaKnown RBP26.3■■□□□ 1.8
TRAF4-207ENST00000461195 PARP1P09874 1014 aaKnown RBP26.3■■□□□ 1.8
TRAF4-207ENST00000461195 SART3Q15020 963 aaKnown RBP26.3■■□□□ 1.8
TRAF4-207ENST00000461195 MUM1L1Q5H9M0 696 aa26.3■■□□□ 1.8
TRAF4-207ENST00000461195 MAMDC4Q6UXC1 1216 aa26.3■■□□□ 1.8
TRAF4-207ENST00000461195 UBA5Q9GZZ9 404 aa26.3■■□□□ 1.8
TRAF4-207ENST00000461195 SYNGAP1Q96PV0 1343 aa26.3■■□□□ 1.8
TRAF4-207ENST00000461195 POTEB2H3BUK9 544 aa26.29■■□□□ 1.8
TRAF4-207ENST00000461195 SLC27A2O14975 620 aa26.29■■□□□ 1.8
TRAF4-207ENST00000461195 C11orf49Q9H6J7 331 aa26.29■■□□□ 1.8
TRAF4-207ENST00000461195 PPP4R2Q9NY27 417 aa26.29■■□□□ 1.8
TRAF4-207ENST00000461195 CNPY2Q9Y2B0 182 aa26.29■■□□□ 1.8
TRAF4-207ENST00000461195 TAL1P17542 331 aaPredicted RBP26.28■■□□□ 1.8
TRAF4-207ENST00000461195 NECTIN1Q15223 517 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 CREB3L3Q68CJ9 461 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 CHST3Q7LGC8 479 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 MB21D2Q8IYB1 491 aaPredicted RBP26.28■■□□□ 1.8
TRAF4-207ENST00000461195 FAM133AQ8N9E0 248 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 FGD4Q96M96 766 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 CPVLQ9H3G5 476 aa26.28■■□□□ 1.8
TRAF4-207ENST00000461195 CNTN2Q02246 1040 aa26.27■■□□□ 1.8
TRAF4-207ENST00000461195 WTAPQ15007 396 aa26.27■■□□□ 1.8
TRAF4-207ENST00000461195 CYP39A1Q9NYL5 469 aa26.27■■□□□ 1.8
TRAF4-207ENST00000461195 WDR19Q8NEZ3 1342 aa26.27■■□□□ 1.8
TRAF4-207ENST00000461195 MCM3APO60318 1980 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 SNAI1O95863 264 aaPredicted RBP26.26■■□□□ 1.79
TRAF4-207ENST00000461195 ZNF865P0CJ78 1059 aaPredicted RBP26.26■■□□□ 1.79
TRAF4-207ENST00000461195 ANTXR2P58335 489 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 TMEM67Q5HYA8 995 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 ANO1Q5XXA6 986 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 NSMFQ6X4W1 530 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 ADGRF4Q8IZF3 695 aa26.26■■□□□ 1.79
TRAF4-207ENST00000461195 RNF20Q5VTR2 975 aa26.25■■□□□ 1.79
TRAF4-207ENST00000461195 CHRDL2Q6WN34 429 aa26.25■■□□□ 1.79
TRAF4-207ENST00000461195 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.25■■□□□ 1.79
TRAF4-207ENST00000461195 MYH6P13533 1939 aa26.24■■□□□ 1.79
TRAF4-207ENST00000461195 DHX16O60231 1041 aaKnown RBP26.24■■□□□ 1.79
TRAF4-207ENST00000461195 COL6A1P12109 1028 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms