RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 ZNF654Q8IZM8 581 aa18.95■□□□□ 0.62
SHANK1-205ENST00000461154 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
SHANK1-205ENST00000461154 MAP3K14Q99558 947 aa18.95■□□□□ 0.62
SHANK1-205ENST00000461154 LRRC2Q9BYS8 371 aa18.95■□□□□ 0.62
SHANK1-205ENST00000461154 PNMA2Q9UL42 364 aa18.95■□□□□ 0.62
SHANK1-205ENST00000461154 CCL5P13501 91 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 KIF5BP33176 963 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 TROAPQ12815 778 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 COL9A3Q14050 684 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-205ENST00000461154 GRM4Q14833 912 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 SNRNP48Q6IEG0 339 aaKnown RBP18.94■□□□□ 0.62
SHANK1-205ENST00000461154 SGMS1Q86VZ5 419 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 TM6SF1Q9BZW5 370 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 RNF208Q9H0X6 261 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-205ENST00000461154 SLC12A7Q9Y666 1083 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
SHANK1-205ENST00000461154 GRB14Q14449 540 aa18.93■□□□□ 0.62
SHANK1-205ENST00000461154 RUFY3Q7L099 469 aa18.93■□□□□ 0.62
SHANK1-205ENST00000461154 CTCFLQ8NI51 663 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-205ENST00000461154 TCEANC2Q96MN5 208 aa18.93■□□□□ 0.62
SHANK1-205ENST00000461154 APBA2Q99767 749 aa18.93■□□□□ 0.62
SHANK1-205ENST00000461154 RANBP17Q9H2T7 1088 aaKnown RBP18.93■□□□□ 0.62
SHANK1-205ENST00000461154 RAVER2Q9HCJ3 691 aaKnown RBP18.93■□□□□ 0.62
SHANK1-205ENST00000461154 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
SHANK1-205ENST00000461154 PALM3A6NDB9 673 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-205ENST00000461154 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
SHANK1-205ENST00000461154 SEC24BO95487 1268 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 GJB1P08034 283 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 HOXC6P09630 235 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 DPP9Q86TI2 863 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 ABRAQ8N0Z2 381 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 UBA5Q9GZZ9 404 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 SLC5A4Q9NY91 659 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 FBXO40Q9UH90 709 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
SHANK1-205ENST00000461154 PLXNB2O15031 1838 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 ICAM1P05362 532 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 FCER1AP12319 257 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 CPA1P15085 419 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 CAPN2P17655 700 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 EN2P19622 333 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-205ENST00000461154 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 GNAQP50148 359 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 TKFCQ3LXA3 575 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 Q6ZUG5 572 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 STAG2Q8N3U4 1231 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 FBXL16Q8N461 479 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 CHST13Q8NET6 341 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 TRIB2Q92519 343 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
SHANK1-205ENST00000461154 ZNF236Q9UL36 1845 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 ADORA2AP29274 412 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 ADGRF4Q8IZF3 695 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 LZTS2Q9BRK4 669 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 HMX1Q9NP08 348 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-205ENST00000461154 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 RIPK3Q9Y572 518 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 ZNF536O15090 1300 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 RPTORQ8N122 1335 aa18.9■□□□□ 0.62
SHANK1-205ENST00000461154 KIAA0100Q14667 2235 aaKnown RBP18.89■□□□□ 0.61
SHANK1-205ENST00000461154 ZBTB43O43298 467 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 GJA8P48165 433 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 SNAP25P60880 206 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 KCTD2Q14681 263 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 MICU3Q86XE3 530 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 MMP19Q99542 508 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 ACAD9Q9H845 621 aa18.89■□□□□ 0.61
SHANK1-205ENST00000461154 UPF2Q9HAU5 1272 aaKnown RBP18.89■□□□□ 0.61
SHANK1-205ENST00000461154 KLF18A0A0U1RQI7 1052 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 ALAS1P13196 640 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 RCAN1P53805 252 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 CDC37Q16543 378 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-205ENST00000461154 CCL14Q16627 93 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 MFSD14CQ5VZR4 134 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
SHANK1-205ENST00000461154 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 BRF1Q92994 677 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 AGXT2Q9BYV1 514 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
SHANK1-205ENST00000461154 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 VAT1LQ9HCJ6 419 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-205ENST00000461154 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 RNF146Q9NTX7 359 aa18.88■□□□□ 0.61
SHANK1-205ENST00000461154 RBM28Q9NW13 759 aaKnown RBP18.88■□□□□ 0.61
SHANK1-205ENST00000461154 SGPL1O95470 568 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
SHANK1-205ENST00000461154 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 TRIM32Q13049 653 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 MAP3K21Q5TCX8 1036 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms