RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 MSL3Q8N5Y2 521 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-202ENST00000461063 LENG1Q96BZ8 264 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-202ENST00000461063 PDLIM7Q9NR12 457 aa10.45□□□□□ -0.74
SOX2-OT-202ENST00000461063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.45□□□□□ -0.74
SOX2-OT-202ENST00000461063 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-202ENST00000461063 SYNGAP1Q96PV0 1343 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 TRIM43BA6NCK2 446 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 POTEMA6NI47 508 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 TMEM232C9JQI7 657 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 ADAMTS4O75173 837 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 OAZ1P54368 228 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 TLE2Q04725 743 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 SH3RF1Q7Z6J0 888 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 ANKRD35Q8N283 1001 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 CHST13Q8NET6 341 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 TRIM43Q96BQ3 446 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 FGD4Q96M96 766 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 FBXO40Q9UH90 709 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 FAM184BQ9ULE4 1060 aa10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 COL11A1P12107 1806 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-202ENST00000461063 SYNRGQ9UMZ2 1314 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 A0A1W2PQ45 241 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 A0A1W2PQY0 241 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 FDX1P10109 184 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 BADQ92934 168 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 IL17RBQ9NRM6 502 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 ANAPC4Q9UJX5 808 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 TACC3Q9Y6A5 838 aa10.43□□□□□ -0.74
SOX2-OT-202ENST00000461063 ZNF536O15090 1300 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 TSPY2A6NKD2 308 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 NMT2O60551 498 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 MCCP23508 829 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 SLC1A4P43007 532 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 STAT2P52630 851 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 ACLYP53396 1101 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 PDE1AP54750 535 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 SHHQ15465 462 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 FAM109BQ6ICB4 259 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 CCSAPQ6IQ19 270 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 POTEGQ6S5H5 508 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 FAM160B2Q86V87 743 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 KLHDC9Q8NEP7 349 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 CHURC1Q8WUH1 139 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 STAG1Q8WVM7 1258 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 AGBL1Q96MI9 1066 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 TSEN34Q9BSV6 310 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 ISY1Q9ULR0 285 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 STX8Q9UNK0 236 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 STXBP5LQ9Y2K9 1186 aa10.42□□□□□ -0.74
SOX2-OT-202ENST00000461063 MYADML2A6NDP7 307 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 KIAA0355O15063 1070 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ADCY6O43306 1168 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 PLA2G6O60733 806 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 PQBP1O60828 265 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 CLTBP09497 229 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 FGRP09769 529 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ITGB8P26012 769 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 NOVP48745 357 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 IRX5P78411 483 aaPredicted RBP10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 CNTN2Q02246 1040 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ALX1Q15699 326 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 KCNA10Q16322 511 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 CCDC144BQ3MJ40 725 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 RCSD1Q6JBY9 416 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ARMCX2Q7L311 632 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 CCDC144CPQ8IYA2 1237 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 FAM133AQ8N9E0 248 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 FAM227BQ96M60 508 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 KATNBL1Q9H079 304 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ABHD16BQ9H3Z7 469 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 A1CFQ9NQ94 594 aaKnown RBP10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 RNF146Q9NTX7 359 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 UNC80Q8N2C7 3258 aa10.41□□□□□ -0.74
SOX2-OT-202ENST00000461063 LTBP2Q14767 1821 aa10.4□□□□□ -0.74
SOX2-OT-202ENST00000461063 A0A0D9SFI3 127 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms