RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 USP5P45974 858 aa7.09□□□□□ -1.27
NUP98-208ENST00000461047 LAMC2Q13753 1193 aa7.09□□□□□ -1.27
NUP98-208ENST00000461047 TBC1D10BQ4KMP7 808 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 FKBP1CQ5VVH2 108 aa7.09□□□□□ -1.27
NUP98-208ENST00000461047 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 APOBEC3FQ8IUX4 373 aaKnown RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 SIX5Q8N196 739 aa7.09□□□□□ -1.27
NUP98-208ENST00000461047 ZNF526Q8TF50 670 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 EDC3Q96F86 508 aaKnown RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 TSPAN10Q9H1Z9 355 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 AVENQ9NQS1 362 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 CTNNA3Q9UI47 895 aa7.09□□□□□ -1.27
NUP98-208ENST00000461047 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
NUP98-208ENST00000461047 CACNA1SQ13698 1873 aa7.09□□□□□ -1.28
NUP98-208ENST00000461047 RPAP1Q9BWH6 1393 aaPredicted RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 GAKO14976 1311 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 RAD50Q92878 1312 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 LTBP1Q14766 1721 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 SFI1A8K8P3 1242 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 EML1O00423 815 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 WNT10BO00744 389 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 REC8O95072 547 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 SLC3A2P08195 630 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 GSPT1P15170 499 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 CHMLP26374 656 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 NF2P35240 595 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 SNRPNP63162 240 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 ZMYM1Q5SVZ6 1142 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 CWC27Q6UX04 472 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 ZSCAN29Q8IWY8 852 aaPredicted RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 TEX11Q8IYF3 940 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 MIGA1Q8NAN2 632 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 DHX36Q9H2U1 1008 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 UPF2Q9HAU5 1272 aaKnown RBP7.08□□□□□ -1.28
NUP98-208ENST00000461047 VEZTQ9HBM0 779 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 ZNF287Q9HBT7 754 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 ATP8A2Q9NTI2 1148 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 AATFQ9NY61 560 aaKnown RBP eCLIP7.08□□□□□ -1.28
NUP98-208ENST00000461047 DAGLAQ9Y4D2 1042 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
NUP98-208ENST00000461047 PITPNM2Q9BZ72 1349 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 PATL2C9JE40 543 aaKnown RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 GPAA1O43292 621 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 ENTPD3O75355 529 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 MBD4O95243 580 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 HLA-DOAP06340 250 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 MCCP23508 829 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 SEC13P55735 322 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 PCBP4P57723 403 aaKnown RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 SUPT20HL1Q3ZLR7 823 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 APOBEC3HQ6NTF7 200 aaKnown RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 CDC42EP5Q6NZY7 148 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 GIMAP6Q6P9H5 292 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 CDC37L1Q7L3B6 337 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 FAM83AQ86UY5 434 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 BTBD6Q96KE9 485 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 PRMT6Q96LA8 375 aaPredicted RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 HINFPQ9BQA5 517 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 TDRD3Q9H7E2 651 aaKnown RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 ARMT1Q9H993 441 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 ZNF70Q9UC06 446 aaPredicted RBP7.07□□□□□ -1.28
NUP98-208ENST00000461047 HCN4Q9Y3Q4 1203 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 SLC4A4Q9Y6R1 1079 aa7.07□□□□□ -1.28
NUP98-208ENST00000461047 CCDC171Q6TFL3 1326 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 TCRBV5S4A2TA0A5A2 114 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 CLRN2A0PK11 232 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 POLR3DP05423 398 aaPredicted RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 ALAS2P22557 587 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 TDO2P48775 406 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 GRIK5Q16478 980 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 NBPF9Q3BBW0 867 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 ANGEL2Q5VTE6 544 aaKnown RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 C1orf53Q5VUE5 145 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 ALYREFQ86V81 257 aaKnown RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 FOXP4Q8IVH2 680 aaPredicted RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 TGFBRAP1Q8WUH2 860 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 FAM151AQ8WW52 585 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 OSBP2Q969R2 916 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 ZBED3Q96IU2 234 aaPredicted RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 STRBPQ96SI9 672 aaKnown RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 IDI2Q9BXS1 227 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 PPP1R12CQ9BZL4 782 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 PHACTR1Q9C0D0 580 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 PUS7LQ9H0K6 701 aaKnown RBP7.06□□□□□ -1.28
NUP98-208ENST00000461047 NAPBQ9H115 298 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 ARAP2Q8WZ64 1704 aa7.06□□□□□ -1.28
NUP98-208ENST00000461047 COL1A1P02452 1464 aaPredicted RBP7.05□□□□□ -1.28
NUP98-208ENST00000461047 TCP10L2B9ZVM9 353 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 GNB5O14775 395 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 MSTNO14793 375 aa7.05□□□□□ -1.28
NUP98-208ENST00000461047 SGSM2O43147 1006 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms