RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SENP6Q9GZR1 1112 aaPredicted RBP15.53■□□□□ 0.08
RAB11FIP3-207ENST00000461009 CNPY2Q9Y2B0 182 aa15.53■□□□□ 0.08
RAB11FIP3-207ENST00000461009 ERICH2A1L162 156 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 PGK2P07205 417 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 COL6A1P12109 1028 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 FXR1P51114 621 aaKnown RBP eCLIP15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 SART3Q15020 963 aaKnown RBP15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 ANKRD35Q8N283 1001 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 CHST13Q8NET6 341 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 GMCL1Q96IK5 515 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 ZSCAN10Q96SZ4 725 aaPredicted RBP15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 ZKSCAN3Q9BRR0 538 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 TINF2Q9BSI4 451 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 SLC38A10Q9HBR0 1119 aa15.52■□□□□ 0.08
RAB11FIP3-207ENST00000461009 PFASO15067 1338 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 SLC27A2O14975 620 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 IGHA2P01877 340 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 RARBP10826 455 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MCCP23508 829 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ZNF792Q3KQV3 632 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 RCSD1Q6JBY9 416 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TRPV1Q8NER1 839 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ANKS1AQ92625 1134 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 KAT14Q9H8E8 782 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 RAVER2Q9HCJ3 691 aaKnown RBP15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PRKAG2Q9UGJ0 569 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ZMYND8Q9ULU4 1186 aaPredicted RBP15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PARP14Q460N5 1801 aa15.51■□□□□ 0.07
RAB11FIP3-207ENST00000461009 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PRAMEF19Q5SWL8 479 aa15.5■□□□□ 0.07
RAB11FIP3-207ENST00000461009 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TNKSO95271 1327 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PLA2G6O60733 806 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 BMP8BP34820 402 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 KRT32Q14532 448 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 CCDC96Q2M329 555 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TKFCQ3LXA3 575 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 GJC2Q5T442 439 aaPredicted RBP15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 IFIT1BQ5T764 474 aaKnown RBP15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ANO1Q5XXA6 986 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 RNF180Q86T96 592 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
RAB11FIP3-207ENST00000461009 SYNGAP1Q96PV0 1343 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 IFIT3O14879 490 aaKnown RBP15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 AKR1A1P14550 325 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 SYN1P17600 705 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MCM5P33992 734 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 LRRC26Q2I0M4 334 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 CYB5R4Q7L1T6 521 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ZNF467Q7Z7K2 595 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TMTC2Q8N394 836 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ENAHQ8N8S7 591 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 LBHD1Q9BQE6 289 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MTA3Q9BTC8 594 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ACAD9Q9H845 621 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 XPNPEP3Q9NQH7 507 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 RIPK3Q9Y572 518 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 CEP290O15078 2479 aa15.48■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ATN1P54259 1190 aaPredicted RBP15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 WTAPQ15007 396 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 GPATCH4Q5T3I0 446 aaKnown RBP15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 STOX1Q6ZVD7 989 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 CHMP4CQ96CF2 233 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 UBE2OQ9C0C9 1292 aaKnown RBP15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PRO3102Q9H379 93 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 HOMER2Q9NSB8 354 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 FAM184BQ9ULE4 1060 aa15.47■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MAGEA10P43363 369 aaPredicted RBP15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 LRRC41Q15345 812 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 SEC23AQ15436 765 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TMEM67Q5HYA8 995 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MAMDC4Q6UXC1 1216 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 MB21D2Q8IYB1 491 aaPredicted RBP15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TMEM87BQ96K49 555 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 GDF15Q99988 308 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 SPC25Q9HBM1 224 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 ZHX1Q9UKY1 873 aaPredicted RBP15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.07
RAB11FIP3-207ENST00000461009 FRMPD3Q5JV73 1810 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 DNAJC25-GNG10A0A024R161 153 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PRC1O43663 620 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 HMGB1P09429 215 aaKnown RBP15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PDHBP11177 359 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ALAS1P13196 640 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 HSPA4P34932 840 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SLC39A5Q6ZMH5 540 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms