RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 FOXC1Q12948 553 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 SNAPC2Q13487 334 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 DOCK1Q14185 1865 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 ZYXQ15942 572 aaKnown RBP8.67□□□□□ -1.02
RTN4-212ENST00000461004 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 TREML2Q5T2D2 321 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 GADL1Q6ZQY3 521 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 ZNF280CQ8ND82 737 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 PHIPQ8WWQ0 1821 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 ROBO3Q96MS0 1386 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 ESYT1Q9BSJ8 1104 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 THSD7BQ9C0I4 1608 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
RTN4-212ENST00000461004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
RTN4-212ENST00000461004 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
RTN4-212ENST00000461004 NMT2O60551 498 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 HSPA8P11142 646 aaKnown RBP8.66□□□□□ -1.02
RTN4-212ENST00000461004 CETPP11597 493 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 BACE1P56817 501 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 SREBF2Q12772 1141 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 COL9A3Q14050 684 aaPredicted RBP8.66□□□□□ -1.02
RTN4-212ENST00000461004 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
RTN4-212ENST00000461004 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 FAM174AQ8TBP5 190 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 LSG1Q9H089 658 aaKnown RBP8.66□□□□□ -1.02
RTN4-212ENST00000461004 CABP5Q9NP86 173 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 ANAPC4Q9UJX5 808 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 ATAD5Q96QE3 1844 aa8.66□□□□□ -1.02
RTN4-212ENST00000461004 RAD50Q92878 1312 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 IGKV6D-41A0A0C4DH26 115 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 PEX10O60683 326 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 CDC45O75419 566 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 FGRP09769 529 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 CYP2C8P10632 490 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 EEF2P13639 858 aaKnown RBP8.65□□□□□ -1.02
RTN4-212ENST00000461004 GRM5P41594 1212 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 LBX1P52954 281 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
RTN4-212ENST00000461004 CAP1Q01518 475 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 TFAP4Q01664 338 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 RRP12Q5JTH9 1297 aaKnown RBP8.65□□□□□ -1.02
RTN4-212ENST00000461004 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 ZNF444Q8N0Y2 327 aaPredicted RBP8.65□□□□□ -1.02
RTN4-212ENST00000461004 CHMP4CQ96CF2 233 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 IL17RBQ9NRM6 502 aa8.65□□□□□ -1.02
RTN4-212ENST00000461004 ZMYM6O95789 1325 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 NEDD4P46934 1319 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 TNFRSF10AO00220 468 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 PDHXO00330 501 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 ZNF213O14771 459 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 RANBP6O60518 1105 aaKnown RBP8.64□□□□□ -1.03
RTN4-212ENST00000461004 CYP21A2P08686 494 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 INHBEP58166 350 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 ICA1Q05084 483 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 PDE4BQ07343 736 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 CRHR2Q13324 411 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 STOX1Q6ZVD7 989 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 STAG1Q8WVM7 1258 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 CEP95Q96GE4 821 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 CCDC17Q96LX7 622 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 CDK15Q96Q40 435 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 AS3MTQ9HBK9 375 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 TOMM22Q9NS69 142 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
RTN4-212ENST00000461004 RBM8AQ9Y5S9 174 aaKnown RBP8.64□□□□□ -1.03
RTN4-212ENST00000461004 LAMB1P07942 1786 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 PTPRFP10586 1907 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ESPNB1AK53 854 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 CA12O43570 354 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ORC4O43929 436 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 SLC3A2P08195 630 aaKnown RBP8.63□□□□□ -1.03
RTN4-212ENST00000461004 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
RTN4-212ENST00000461004 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
RTN4-212ENST00000461004 RASGRP2Q7LDG7 609 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ANKRD23Q86SG2 305 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 SPICE1Q8N0Z3 855 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 LRRC47Q8N1G4 583 aaKnown RBP8.63□□□□□ -1.03
RTN4-212ENST00000461004 NUP88Q99567 741 aaPredicted RBP8.63□□□□□ -1.03
RTN4-212ENST00000461004 FEZ1Q99689 392 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ARID3AQ99856 593 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ZKSCAN3Q9BRR0 538 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 KIAA1683Q9H0B3 1180 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 MTMR4Q9NYA4 1195 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 CLIP2Q9UDT6 1046 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 CPA4Q9UI42 421 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 AGTPBP1Q9UPW5 1226 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 TMX2Q9Y320 296 aa8.63□□□□□ -1.03
RTN4-212ENST00000461004 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms