RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 C16orf86Q6ZW13 317 aa17.41■□□□□ 0.38
NCK1-202ENST00000460960 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
NCK1-202ENST00000460960 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
NCK1-202ENST00000460960 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
NCK1-202ENST00000460960 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
NCK1-202ENST00000460960 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
NCK1-202ENST00000460960 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
NCK1-202ENST00000460960 ADAMTS5Q9UNA0 930 aa17.41■□□□□ 0.38
NCK1-202ENST00000460960 ROBO3Q96MS0 1386 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 MYO9BQ13459 2157 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 TIMP1P01033 207 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 C6orf222P0C671 652 aaPredicted RBP17.4■□□□□ 0.38
NCK1-202ENST00000460960 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
NCK1-202ENST00000460960 ANKRD33Q7Z3H0 272 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 GLT1D1Q96MS3 346 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 TOX2Q96NM4 488 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 GAS2L1Q99501 681 aaPredicted RBP17.4■□□□□ 0.38
NCK1-202ENST00000460960 SLF1Q9BQI6 1058 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.4■□□□□ 0.38
NCK1-202ENST00000460960 TTC28Q96AY4 2481 aa17.4■□□□□ 0.38
NCK1-202ENST00000460960 MYADML2A6NDP7 307 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 MOXD2PA6NHM9 499 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 HIP1O00291 1037 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 GNAT2P19087 354 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 PPIGQ13427 754 aaKnown RBP eCLIP17.39■□□□□ 0.37
NCK1-202ENST00000460960 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
NCK1-202ENST00000460960 GRXCR1A8MXD5 290 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 PBX2P40425 430 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 TDO2P48775 406 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 IRX5P78411 483 aaPredicted RBP17.38■□□□□ 0.37
NCK1-202ENST00000460960 PTH1RQ03431 593 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 GIMAP6Q6P9H5 292 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 CCDC174Q6PII3 467 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 PPP1R12CQ9BZL4 782 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 SPC25Q9HBM1 224 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 MCM3APO60318 1980 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 MROH7Q68CQ1 1323 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
NCK1-202ENST00000460960 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 TNFRSF10AO00220 468 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 SGSM2O43147 1006 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 SNAI1O95863 264 aaPredicted RBP17.37■□□□□ 0.37
NCK1-202ENST00000460960 FGAP02671 866 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 ACRP10323 421 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 SBK1Q52WX2 424 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
NCK1-202ENST00000460960 PRDM12Q9H4Q4 367 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 INCENPQ9NQS7 918 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
NCK1-202ENST00000460960 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
NCK1-202ENST00000460960 SPTBN5Q9NRC6 3674 aaKnown RBP17.36■□□□□ 0.37
NCK1-202ENST00000460960 ZBED4O75132 1171 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 DUSP11O75319 330 aaKnown RBP17.36■□□□□ 0.37
NCK1-202ENST00000460960 ASGR1P07306 291 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 CSF2RAP15509 400 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 CTDSPL2Q05D32 466 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 ACVR2BQ13705 512 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 TMEM240Q5SV17 173 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 ANKRD35Q8N283 1001 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 TMEM199Q8N511 208 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 PCSK9Q8NBP7 692 aaKnown RBP17.36■□□□□ 0.37
NCK1-202ENST00000460960 KIFC2Q96AC6 838 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 PBX4Q9BYU1 374 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 NAPBQ9H115 298 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 MKNK2Q9HBH9 465 aa17.36■□□□□ 0.37
NCK1-202ENST00000460960 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.36■□□□□ 0.37
NCK1-202ENST00000460960 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
NCK1-202ENST00000460960 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
NCK1-202ENST00000460960 TLR3O15455 904 aaKnown RBP17.35■□□□□ 0.37
NCK1-202ENST00000460960 NDUFB10O96000 172 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 COL9A1P20849 921 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 IGFBP4P22692 258 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 HAND2P61296 217 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 ALX1Q15699 326 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 CCDC85BQ15834 202 aaPredicted RBP17.35■□□□□ 0.37
NCK1-202ENST00000460960 GNASQ5JWF2 1037 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
NCK1-202ENST00000460960 ESYT1Q9BSJ8 1104 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
NCK1-202ENST00000460960 ELP1O95163 1332 aa17.35■□□□□ 0.37
NCK1-202ENST00000460960 F5H6K3 240 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 CDC45O75419 566 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 PRDM1O75626 825 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 KLRC3Q07444 240 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 PPARAQ07869 468 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 CCDC144BQ3MJ40 725 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
NCK1-202ENST00000460960 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
NCK1-202ENST00000460960 MAMDC4Q6UXC1 1216 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 ZNF365Q70YC5 407 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
NCK1-202ENST00000460960 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 RAD50Q92878 1312 aa17.34■□□□□ 0.37
NCK1-202ENST00000460960 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms